Download MendeleyMechanism of exon ligation by human spliceosome
Zhan, X., Lu, Y., Zhang, X., Yan, C., Shi, Y.(2022) Mol Cell
7W5A
The cryo-EM structure of human pre-C*-II complex
- PDB DOI: 10.2210/pdb7W5A/pdb
- EM Map EMD-32319: EMDB EMDataResource
- Classification: SPLICING
- Organism(s): Homo sapiens, unidentified adenovirus
- Mutation(s): No
- Deposited: 2021-11-29 Released: 2022-06-22
- Funding Organization(s): National Natural Science Foundation of China (NSFC)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 3.60 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
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Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Pre-mRNA-processing-splicing factor 8 | A | 2335 | Homo sapiens | Mutation(s): 0 Gene Names: PRPF8, PRPC8 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q6P2Q9 (Homo sapiens) Explore Q6P2Q9 Go to UniProtKB: Q6P2Q9 | |||||
PHAROS: Q6P2Q9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q6P2Q9 | ||||
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Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 116 kDa U5 small nuclear ribonucleoprotein component | C | 972 | Homo sapiens | Mutation(s): 0 Gene Names: EFTUD2, KIAA0031, SNRP116 |  |
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Find proteins for Q15029 (Homo sapiens) Explore Q15029 Go to UniProtKB: Q15029 | |||||
PHAROS: Q15029 | |||||
Entity Groups | |||||
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| UniProt Group | Q15029 | ||||
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Entity ID: 4 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| U5 small nuclear ribonucleoprotein 40 kDa protein | D [auth E] | 357 | Homo sapiens | Mutation(s): 0 Gene Names: SNRNP40, PRP8BP, SFP38, WDR57 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q96DI7 (Homo sapiens) Explore Q96DI7 Go to UniProtKB: Q96DI7 | |||||
PHAROS: Q96DI7 | |||||
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| UniProt Group | Q96DI7 | ||||
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Entity ID: 9 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Pre-mRNA-splicing factor SYF1 | I | 855 | Homo sapiens | Mutation(s): 0 Gene Names: XAB2, HCNP, KIAA1177, SYF1, PP3898 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9HCS7 (Homo sapiens) Explore Q9HCS7 Go to UniProtKB: Q9HCS7 | |||||
PHAROS: Q9HCS7 | |||||
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| UniProt Group | Q9HCS7 | ||||
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Entity ID: 10 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Crooked neck-like protein 1 | J | 848 | Homo sapiens | Mutation(s): 0 Gene Names: CRNKL1, CRN, CGI-201, MSTP021 |  |
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Find proteins for Q9BZJ0 (Homo sapiens) Explore Q9BZJ0 Go to UniProtKB: Q9BZJ0 | |||||
PHAROS: Q9BZJ0 | |||||
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| UniProt Group | Q9BZJ0 | ||||
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Entity ID: 11 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Pre-mRNA-splicing factor SPF27 | K | 225 | Homo sapiens | Mutation(s): 0 Gene Names: BCAS2, DAM1 |  |
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Find proteins for O75934 (Homo sapiens) Explore O75934 Go to UniProtKB: O75934 | |||||
PHAROS: O75934 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O75934 | ||||
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Entity ID: 12 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Cell division cycle 5-like protein | L | 802 | Homo sapiens | Mutation(s): 0 Gene Names: CDC5L, KIAA0432, PCDC5RP |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q99459 (Homo sapiens) Explore Q99459 Go to UniProtKB: Q99459 | |||||
PHAROS: Q99459 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q99459 | ||||
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Entity ID: 13 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Pre-mRNA-splicing factor SYF2 | M | 243 | Homo sapiens | Mutation(s): 0 Gene Names: SYF2, CBPIN, GCIPIP |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O95926 (Homo sapiens) Explore O95926 Go to UniProtKB: O95926 | |||||
PHAROS: O95926 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O95926 | ||||
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Entity ID: 14 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Protein BUD31 homolog | N | 144 | Homo sapiens | Mutation(s): 0 Gene Names: BUD31, EDG2 |  |
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Find proteins for P41223 (Homo sapiens) Explore P41223 Go to UniProtKB: P41223 | |||||
PHAROS: P41223 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P41223 | ||||
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Entity ID: 15 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Pre-mRNA-splicing factor RBM22 | O | 420 | Homo sapiens | Mutation(s): 0 Gene Names: RBM22, ZC3H16, 199G4 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9NW64 (Homo sapiens) Explore Q9NW64 Go to UniProtKB: Q9NW64 | |||||
PHAROS: Q9NW64 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9NW64 | ||||
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Entity ID: 16 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Spliceosome-associated protein CWC15 homolog | P | 229 | Homo sapiens | Mutation(s): 0 Gene Names: CWC15, C11orf5, AD-002, HSPC148 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9P013 (Homo sapiens) Explore Q9P013 Go to UniProtKB: Q9P013 | |||||
PHAROS: Q9P013 | |||||
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| UniProt Group | Q9P013 | ||||
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Entity ID: 17 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| RNA helicase aquarius | Q | 1485 | Homo sapiens | Mutation(s): 0 Gene Names: AQR, KIAA0560 EC: 3.6.4.13 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O60306 (Homo sapiens) Explore O60306 Go to UniProtKB: O60306 | |||||
PHAROS: O60306 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O60306 | ||||
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Entity ID: 18 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| SNW domain-containing protein 1 | R | 536 | Homo sapiens | Mutation(s): 0 Gene Names: SNW1, SKIIP, SKIP |  |
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Find proteins for Q13573 (Homo sapiens) Explore Q13573 Go to UniProtKB: Q13573 | |||||
PHAROS: Q13573 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q13573 | ||||
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Entity ID: 19 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Peptidyl-prolyl cis-trans isomerase-like 1 | S | 166 | Homo sapiens | Mutation(s): 0 Gene Names: PPIL1, CYPL1, CGI-124, UNQ2425/PRO4984 EC: 5.2.1.8 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9Y3C6 (Homo sapiens) Explore Q9Y3C6 Go to UniProtKB: Q9Y3C6 | |||||
PHAROS: Q9Y3C6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9Y3C6 | ||||
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Entity ID: 20 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Pleiotropic regulator 1 | T | 514 | Homo sapiens | Mutation(s): 0 Gene Names: PLRG1 |  |
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Find proteins for O43660 (Homo sapiens) Explore O43660 Go to UniProtKB: O43660 | |||||
PHAROS: O43660 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O43660 | ||||
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Entity ID: 21 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Serine/arginine repetitive matrix protein 2 | U | 2752 | Homo sapiens | Mutation(s): 0 Gene Names: SRRM2, KIAA0324, SRL300, SRM300, HSPC075 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9UQ35 (Homo sapiens) Explore Q9UQ35 Go to UniProtKB: Q9UQ35 | |||||
PHAROS: Q9UQ35 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9UQ35 | ||||
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Entity ID: 22 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Pre-mRNA-splicing factor CWC22 homolog | V | 908 | Homo sapiens | Mutation(s): 0 Gene Names: CWC22, KIAA1604, NCM |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9HCG8 (Homo sapiens) Explore Q9HCG8 Go to UniProtKB: Q9HCG8 | |||||
PHAROS: Q9HCG8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9HCG8 | ||||
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Entity ID: 23 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Pre-mRNA-processing factor 17 | W | 579 | Homo sapiens | Mutation(s): 0 Gene Names: CDC40, EHB3, PRP17, PRPF17 |  |
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Find proteins for O60508 (Homo sapiens) Explore O60508 Go to UniProtKB: O60508 | |||||
PHAROS: O60508 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O60508 | ||||
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Entity ID: 24 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| PSME3-interacting protein | X | 254 | Homo sapiens | Mutation(s): 0 Gene Names: PSME3IP1, C16orf94, FAM192A, NIP30, PIP30, CDA018, CDA10 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9GZU8 (Homo sapiens) Explore Q9GZU8 Go to UniProtKB: Q9GZU8 | |||||
PHAROS: Q9GZU8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9GZU8 | ||||
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Entity ID: 25 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| ATP-dependent RNA helicase DHX8 | Y | 1220 | Homo sapiens | Mutation(s): 0 Gene Names: DHX8, DDX8 EC: 3.6.4.13 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q14562 (Homo sapiens) Explore Q14562 Go to UniProtKB: Q14562 | |||||
PHAROS: Q14562 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q14562 | ||||
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Entity ID: 26 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Cactin | Z | 758 | Homo sapiens | Mutation(s): 0 Gene Names: CACTIN, C19orf29 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q8WUQ7 (Homo sapiens) Explore Q8WUQ7 Go to UniProtKB: Q8WUQ7 | |||||
PHAROS: Q8WUQ7 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8WUQ7 | ||||
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Entity ID: 27 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| PRKR-interacting protein 1 | AA [auth 2] | 184 | Homo sapiens | Mutation(s): 0 Gene Names: PRKRIP1 |  |
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Find proteins for Q9H875 (Homo sapiens) Explore Q9H875 Go to UniProtKB: Q9H875 | |||||
PHAROS: Q9H875 | |||||
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| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9H875 | ||||
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Entity ID: 28 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Protein FAM32A | BA [auth z] | 112 | Homo sapiens | Mutation(s): 0 Gene Names: FAM32A, OTAG12, CGI-144 |  |
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Find proteins for Q9Y421 (Homo sapiens) Explore Q9Y421 Go to UniProtKB: Q9Y421 | |||||
PHAROS: Q9Y421 | |||||
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| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9Y421 | ||||
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Entity ID: 29 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small nuclear ribonucleoprotein-associated proteins B and B' | CA [auth b], TA [auth i] | 240 | Homo sapiens | Mutation(s): 0 Gene Names: SNRPB, COD, SNRPB1 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P14678 (Homo sapiens) Explore P14678 Go to UniProtKB: P14678 | |||||
PHAROS: P14678 | |||||
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| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P14678 | ||||
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Entity ID: 30 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Peptidyl-prolyl cis-trans isomerase E | DA [auth y] | 301 | Homo sapiens | Mutation(s): 0 Gene Names: PPIE, CYP33 EC: 5.2.1.8 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9UNP9 (Homo sapiens) Explore Q9UNP9 Go to UniProtKB: Q9UNP9 | |||||
PHAROS: Q9UNP9 | |||||
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| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9UNP9 | ||||
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Entity ID: 31 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small nuclear ribonucleoprotein Sm D3 | EA [auth a], SA [auth h] | 126 | Homo sapiens | Mutation(s): 0 Gene Names: SNRPD3 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P62318 (Homo sapiens) Explore P62318 Go to UniProtKB: P62318 | |||||
PHAROS: P62318 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P62318 | ||||
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Entity ID: 32 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small nuclear ribonucleoprotein Sm D1 | FA [auth c], UA [auth j] | 119 | Homo sapiens | Mutation(s): 0 Gene Names: SNRPD1 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P62314 (Homo sapiens) Explore P62314 Go to UniProtKB: P62314 | |||||
PHAROS: P62314 | |||||
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| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P62314 | ||||
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Entity ID: 33 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small nuclear ribonucleoprotein Sm D2 | GA [auth d], VA [auth k] | 118 | Homo sapiens | Mutation(s): 0 Gene Names: SNRPD2, SNRPD1 |  |
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Find proteins for P62316 (Homo sapiens) Explore P62316 Go to UniProtKB: P62316 | |||||
PHAROS: P62316 | |||||
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| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P62316 | ||||
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Entity ID: 34 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small nuclear ribonucleoprotein F | HA [auth f], WA [auth m] | 86 | Homo sapiens | Mutation(s): 0 Gene Names: SNRPF, PBSCF |  |
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Find proteins for P62306 (Homo sapiens) Explore P62306 Go to UniProtKB: P62306 | |||||
PHAROS: P62306 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P62306 | ||||
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Entity ID: 35 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small nuclear ribonucleoprotein E | IA [auth e], XA [auth l] | 92 | Homo sapiens | Mutation(s): 0 Gene Names: SNRPE |  |
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Find proteins for P62304 (Homo sapiens) Explore P62304 Go to UniProtKB: P62304 | |||||
PHAROS: P62304 | |||||
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| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P62304 | ||||
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Entity ID: 36 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Small nuclear ribonucleoprotein G | JA [auth g], YA [auth n] | 76 | Homo sapiens | Mutation(s): 0 Gene Names: SNRPG, PBSCG |  |
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Find proteins for P62308 (Homo sapiens) Explore P62308 Go to UniProtKB: P62308 | |||||
PHAROS: P62308 | |||||
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| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P62308 | ||||
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Entity ID: 37 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Protein mago nashi homolog | KA [auth v] | 146 | Homo sapiens | Mutation(s): 0 Gene Names: MAGOH, MAGOHA |  |
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Find proteins for P61326 (Homo sapiens) Explore P61326 Go to UniProtKB: P61326 | |||||
PHAROS: P61326 | |||||
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| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P61326 | ||||
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Entity ID: 38 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| RNA-binding protein 8A | LA [auth w] | 174 | Homo sapiens | Mutation(s): 0 Gene Names: RBM8A, RBM8, HSPC114, MDS014 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9Y5S9 (Homo sapiens) Explore Q9Y5S9 Go to UniProtKB: Q9Y5S9 | |||||
PHAROS: Q9Y5S9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9Y5S9 | ||||
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Entity ID: 39 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Eukaryotic initiation factor 4A-III | MA [auth u] | 411 | Homo sapiens | Mutation(s): 0 Gene Names: EIF4A3, DDX48, KIAA0111 EC: 3.6.4.13 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P38919 (Homo sapiens) Explore P38919 Go to UniProtKB: P38919 | |||||
PHAROS: P38919 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P38919 | ||||
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Entity ID: 40 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Protein CASC3 | NA [auth x] | 703 | Homo sapiens | Mutation(s): 0 Gene Names: CASC3, MLN51 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O15234 (Homo sapiens) Explore O15234 Go to UniProtKB: O15234 | |||||
PHAROS: O15234 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O15234 | ||||
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Entity ID: 41 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Pre-mRNA-processing factor 19 | OA [auth q], PA [auth r], QA [auth s], RA [auth t] | 504 | Homo sapiens | Mutation(s): 0 Gene Names: PRPF19, NMP200, PRP19, SNEV EC: 2.3.2.27 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9UMS4 (Homo sapiens) Explore Q9UMS4 Go to UniProtKB: Q9UMS4 | |||||
PHAROS: Q9UMS4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9UMS4 | ||||
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Entity ID: 42 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| U2 small nuclear ribonucleoprotein A' | ZA [auth o] | 255 | Homo sapiens | Mutation(s): 0 Gene Names: SNRPA1 |  |
UniProt | |||||
Find proteins for P09661 (Homo sapiens) Explore P09661 Go to UniProtKB: P09661 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P09661 | ||||
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Entity ID: 43 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| U2 small nuclear ribonucleoprotein B'' | AB [auth p] | 225 | Homo sapiens | Mutation(s): 0 Gene Names: SNRPB2 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P08579 (Homo sapiens) Explore P08579 Go to UniProtKB: P08579 | |||||
PHAROS: P08579 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P08579 | ||||
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Entity ID: 44 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Pre-mRNA-splicing factor SLU7 | BB [auth 1] | 586 | Homo sapiens | Mutation(s): 0 Gene Names: SLU7 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O95391 (Homo sapiens) Explore O95391 Go to UniProtKB: O95391 | |||||
PHAROS: O95391 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O95391 | ||||
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| |||||
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Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| U5 snRNA | B | 117 | Homo sapiens |  | |
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Entity ID: 5 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| U6 snRNA | E [auth F] | 107 | Homo sapiens |  | |
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Entity ID: 6 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| Pre-mRNA | F [auth 4] | 46 | unidentified adenovirus |  | |
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Entity ID: 7 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| Pre-mRNA | G | 174 | unidentified adenovirus |  | |
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Entity ID: 8 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| U2 snRNA | H | 188 | Homo sapiens |  | |
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Small Molecules
| Ligands 5 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| IHP (Subject of Investigation/LOI) Query on IHP | CB [auth A] | INOSITOL HEXAKISPHOSPHATE C6 H18 O24 P6 IMQLKJBTEOYOSI-GPIVLXJGSA-N |  | Ligand Interaction | |
| GTP (Subject of Investigation/LOI) Query on GTP | DB [auth C] | GUANOSINE-5'-TRIPHOSPHATE C10 H16 N5 O14 P3 XKMLYUALXHKNFT-UUOKFMHZSA-N |  | Ligand Interaction | |
| ATP (Subject of Investigation/LOI) Query on ATP | RB [auth Q] | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N |  | Ligand Interaction | |
| ZN (Subject of Investigation/LOI) Query on ZN | LB [auth N], MB [auth N], NB [auth N], OB [auth O], PB [auth O], | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | Ligand Interaction | |
| MG (Subject of Investigation/LOI) Query on MG | EB [auth C], FB [auth F], GB [auth F], HB [auth F], IB [auth F], | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| SEP Query on SEP | R | L-PEPTIDE LINKING | C3 H8 N O6 P |  | SER |
Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 3.60 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
Entry History & Funding Information
Deposition Data
- Deposited Date: 2021-11-29
- Released Date: 2022-06-22 Deposition Author(s): Zhan, X., Lu, Y., Shi, Y.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Natural Science Foundation of China (NSFC) | China | -- |
Revision History (Full details and data files)
- Version 1.0: 2022-06-22
Type: Initial release
