High/low resolution monomeric PLP-dependent transaminase from Desulfobacula toluolica
Matyuta, I.O., Bakunova, A.K., Nikolaeva, A.Y., Rakitina, T.V., Popov, V.O., Bezsudnova, E.Y., Boyko, K.M.To be published.
Experimental Data Snapshot
Starting Model: in silico
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Dat: predicted D-alanine aminotransferase | 286 | Desulfobacula toluolica | Mutation(s): 0  EC: 2.6.1.21 | ||
UniProt | |||||
Find proteins for K0NPP0 (Desulfobacula toluolica (strain DSM 7467 / Tol2)) Explore K0NPP0  Go to UniProtKB:  K0NPP0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | K0NPP0 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PLP (Subject of Investigation/LOI) Query on PLP | B [auth A] | PYRIDOXAL-5'-PHOSPHATE C8 H10 N O6 P NGVDGCNFYWLIFO-UHFFFAOYSA-N | |||
PEG Query on PEG | C [auth A] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
GOL Query on GOL | D [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 37.847 | α = 90 |
b = 56.226 | β = 90 |
c = 118.625 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
Aimless | data scaling |
DIALS | data reduction |
MOLREP | phasing |
PDB_EXTRACT | data extraction |
Funding Organization | Location | Grant Number |
---|---|---|
Not funded | -- |