7O80
Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
L [auth AZ] | Ribosomal_S2_2 | e7o80AZ1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Ribosomal protein S2/SIS domain (From Topology) | T: Ribosomal protein S2/SIS domain | F: Ribosomal_S2_2 | ECOD (1.6) |
M [auth Aa] | Ribosomal_S3Ae_N | e7o80Aa1 | A: beta barrels | X: Ribosomal protein L25-like | H: 40S ribosomal protein S3A N-terminal domain (From Topology) | T: 40S ribosomal protein S3A N-terminal domain | F: Ribosomal_S3Ae_N | ECOD (1.6) |
M [auth Aa] | Ribosomal_S3Ae_C | e7o80Aa2 | A: a+b two layers | X: T-fold | H: 40S ribosomal protein S3A C-terminal domain (From Topology) | T: 40S ribosomal protein S3A C-terminal domain | F: Ribosomal_S3Ae_C | ECOD (1.6) |
N [auth Ab] | Ribosomal_S5_C_1 | e7o80Ab1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Ribosomal_S5_C_1 | ECOD (1.6) |
N [auth Ab] | Ribosomal_S5_3 | e7o80Ab3 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: Ribosomal_S5_3 | ECOD (1.6) |
N [auth Ab] | Ribosomal_S5_2 | e7o80Ab2 | A: extended segments | X: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology) | H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology) | T: N-terminal region in 40S ribosomal protein rpS2 (S5p) | F: Ribosomal_S5_2 | ECOD (1.6) |
O [auth Ac] | Ribosomal_S3_C | e7o80Ac1 | A: a+b two layers | X: T-fold | H: Ribosomal protein S3-C (From Topology) | T: Ribosomal protein S3-C | F: Ribosomal_S3_C | ECOD (1.6) |
O [auth Ac] | KH_2_3 | e7o80Ac2 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Prokaryotic type KH domain (KH-domain type II) | F: KH_2_3 | ECOD (1.6) |
P [auth Ad] | Ribosomal_S4e | e7o80Ad1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_S4e | ECOD (1.6) |
P [auth Ad] | 40S_S4_C | e7o80Ad3 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: 40S_S4_C | ECOD (1.6) |
P [auth Ad] | RS4NT | e7o80Ad2 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: RS4NT | ECOD (1.6) |
Q [auth Ae] | Ribosomal_S7_1 | e7o80Ae1 | A: alpha arrays | X: Ribosomal protein S7 (From Topology) | H: Ribosomal protein S7 (From Topology) | T: Ribosomal protein S7 | F: Ribosomal_S7_1 | ECOD (1.6) |
R [auth Af] | Ribosomal_S6e | e7o80Af1 | A: beta barrels | X: Ribosomal protein L25-like | H: Ribosomal protein L25-like (From Topology) | T: Ribosomal protein L25-like | F: Ribosomal_S6e | ECOD (1.6) |
S [auth Ag] | Ribosomal_S7e_N | e7o80Ag2 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: 40S ribosomal protein S7-A (From Topology) | T: 40S ribosomal protein S7-A | F: Ribosomal_S7e_N | ECOD (1.6) |
S [auth Ag] | Ribosomal_S7e_C_1 | e7o80Ag1 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: 40S ribosomal protein S7-A (From Topology) | T: 40S ribosomal protein S7-A | F: Ribosomal_S7e_C_1 | ECOD (1.6) |
B [auth AA] | Ribosomal_S27e | e7o80AA1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_S27e | ECOD (1.6) |
T [auth Ah] | Ribosomal_S8e | e7o80Ah1 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: Ribosomal_S8e | ECOD (1.6) |
U [auth Ai] | S4 | e7o80Ai1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: S4 | ECOD (1.6) |
V [auth Aj] | S10_plectin | e7o80Aj1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: S10_plectin | ECOD (1.6) |
W [auth Ak] | Ribosomal_S17_1 | e7o80Ak1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_S17_1 | ECOD (1.6) |
X [auth Al] | Ribosomal_L7Ae | e7o80Al1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: L30e-like (From Topology) | T: L30e-like | F: Ribosomal_L7Ae | ECOD (1.6) |
Y [auth Am] | Ribosomal_S13_N | e7o80Am2 | A: alpha arrays | X: HTH | H: 40S ribosomal protein S13 N-terminal domain (From Topology) | T: 40S ribosomal protein S13 N-terminal domain | F: Ribosomal_S13_N | ECOD (1.6) |
Y [auth Am] | Ribosomal_S15_2 | e7o80Am1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Ribosomal_S15_2 | ECOD (1.6) |
Z [auth An] | Ribosomal_S11 | e7o80An1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_S11 | ECOD (1.6) |
AA [auth Ao] | Ribosomal_S19 | e7o80Ao1 | A: a+b two layers | X: Ribosomal protein S19 (From Topology) | H: Ribosomal protein S19 (From Topology) | T: Ribosomal protein S19 | F: Ribosomal_S19 | ECOD (1.6) |
BA [auth Ap] | Ribosomal_S9 | e7o80Ap1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Ribosomal_S9 | ECOD (1.6) |
CA [auth Aq] | Ribosomal_S17e | e7o80Aq1 | A: alpha arrays | X: HTH | H: HTH | T: FF domain | F: Ribosomal_S17e | ECOD (1.6) |
C [auth AB] | Ribosomal_S28e | e7o80AB1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_S28e | ECOD (1.6) |
DA [auth Ar] | Ribosomal_S13 | e7o80Ar1 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: Ribosomal_S13 | ECOD (1.6) |
EA [auth As] | Ribosomal_S19e | e7o80As1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: Ribosomal_S19e | ECOD (1.6) |
FA [auth At] | Ribosomal_S10_1 | e7o80At1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: Ribosomal_S10_1 | ECOD (1.6) |
GA [auth Au] | Ribosomal_S21e | e7o80Au1 | A: a+b two layers | X: 40S ribosomal protein rpS21 (S21e) (From Topology) | H: 40S ribosomal protein rpS21 (S21e) (From Topology) | T: 40S ribosomal protein rpS21 (S21e) | F: Ribosomal_S21e | ECOD (1.6) |
HA [auth Av] | Ribosomal_S8_N_1 | e7o80Av2 | A: a+b two layers | X: R3H domain-like | H: Ribosomal protein S8, N-terminal domain (From Topology) | T: Ribosomal protein S8, N-terminal domain | F: Ribosomal_S8_N_1 | ECOD (1.6) |
HA [auth Av] | Ribosomal_S8_C_1 | e7o80Av1 | A: a+b two layers | X: Ribosomal protein S8, C-terminal domain (From Topology) | H: Ribosomal protein S8, C-terminal domain (From Topology) | T: Ribosomal protein S8, C-terminal domain | F: Ribosomal_S8_C_1 | ECOD (1.6) |
IA [auth Aw] | Ribosom_S12_S23 | e7o80Aw1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosom_S12_S23 | ECOD (1.6) |
JA [auth Ax] | Ribosomal_S24e | e7o80Ax1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: Ribosomal_S24e | ECOD (1.6) |
KA [auth Ay] | Ribosomal_S25 | e7o80Ay1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: Ribosomal_S25 | ECOD (1.6) |
LA [auth Az] | Ribosomal_L41 | e7o80Az1 | A: extended segments | X: Ribosomal protein L41-A (From Topology) | H: Ribosomal protein L41-A (From Topology) | T: Ribosomal protein L41-A | F: Ribosomal_L41 | ECOD (1.6) |
D [auth AC] | Ribosomal_S27 | e7o80AC1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_S27 | ECOD (1.6) |
PA [auth BA] | Ribosomal_L2_1 | e7o80BA2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_L2_1 | ECOD (1.6) |
PA [auth BA] | Ribosomal_L2_C_2 | e7o80BA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L2_C_2 | ECOD (1.6) |
QA [auth BB] | Ribosomal_L3 | e7o80BB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Ribosomal_L3 | ECOD (1.6) |
RA [auth BC] | Ribosomal_L4 | e7o80BC2 | A: a/b three-layered sandwiches | X: Ribosomal protein L4 (From Topology) | H: Ribosomal protein L4 (From Topology) | T: Ribosomal protein L4 | F: Ribosomal_L4 | ECOD (1.6) |
RA [auth BC] | Ribos_L4_asso_C | e7o80BC1 | A: extended segments | X: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology) | H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology) | T: C-terminal helical region in 60S ribosomal protein L4 (L4p) | F: Ribos_L4_asso_C | ECOD (1.6) |
SA [auth BD] | Ribosomal_L5e | e7o80BD1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_L5e | ECOD (1.6) |
TA [auth BE] | Ribosomal_L6e | e7o80BE1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L6e | ECOD (1.6) |
UA [auth BF] | Ribosomal_L30_1 | e7o80BF1 | A: a+b two layers | X: Ribosomal protein L30p/L7e (From Topology) | H: Ribosomal protein L30p/L7e (From Topology) | T: Ribosomal protein L30p/L7e | F: Ribosomal_L30_1 | ECOD (1.6) |
VA [auth BG] | Ribosomal_L7Ae_1 | e7o80BG1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: L30e-like (From Topology) | T: L30e-like | F: Ribosomal_L7Ae_1 | ECOD (1.6) |
WA [auth BH] | Ribosomal_L6_2 | e7o80BH2 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: Ribosomal_L6_2 | ECOD (1.6) |
WA [auth BH] | Ribosomal_L6 | e7o80BH1 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: Ribosomal_L6 | ECOD (1.6) |
E [auth AD] | Ribosomal_S30 | e7o80AD1 | A: extended segments | X: 40S ribosomal protein S30 (S30e) (From Topology) | H: 40S ribosomal protein S30 (S30e) (From Topology) | T: 40S ribosomal protein S30 (S30e) | F: Ribosomal_S30 | ECOD (1.6) |
XA [auth BI] | Ribosomal_L16 | e7o80BI1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal protein L10e | F: Ribosomal_L16 | ECOD (1.6) |
YA [auth BJ] | Ribosomal_L5_C | e7o80BJ1 | A: a+b two layers | X: Ribosomal protein L5 (From Topology) | H: Ribosomal protein L5 (From Topology) | T: Ribosomal protein L5 | F: Ribosomal_L5_C | ECOD (1.6) |
AB [auth BL] | Ribosomal_L13e | e7o80BL1 | A: extended segments | X: RPL13 (From Topology) | H: RPL13 (From Topology) | T: RPL13 | F: Ribosomal_L13e | ECOD (1.6) |
BB [auth BM] | Ribosomal_L14e | e7o80BM1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L14e | ECOD (1.6) |
CB [auth BN] | Ribosomal_L15e | e7o80BN1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: Ribosomal_L15e | ECOD (1.6) |
DB [auth BO] | Ribosomal_L13 | e7o80BO1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L13 and L16-A (From Topology) | T: Ribosomal protein L13 and L16-A | F: Ribosomal_L13 | ECOD (1.6) |
EB [auth BP] | Ribosomal_L22 | e7o80BP1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Ribosomal protein L22 (From Topology) | T: Ribosomal protein L22 | F: Ribosomal_L22 | ECOD (1.6) |
FB [auth BQ] | Ribosomal_L18 | e7o80BQ1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: Ribosomal_L18 | ECOD (1.6) |
GB [auth BR] | Ribosomal_L19e_N | e7o80BR1 | A: alpha arrays | X: Ribosomal protein L19 (L19e) N-terminal domain (From Topology) | H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology) | T: Ribosomal protein L19 (L19e) N-terminal domain | F: Ribosomal_L19e_N | ECOD (1.6) |
GB [auth BR] | Ribosomal_L19e_C | e7o80BR2 | A: alpha bundles | X: Ribosomal protein L19 (L19e) C-terminal domain (From Topology) | H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology) | T: Ribosomal protein L19 (L19e) C-terminal domain | F: Ribosomal_L19e_C | ECOD (1.6) |
F [auth AE] | Ribosomal_S26e | e7o80AE1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: Ribosomal_S26e | ECOD (1.6) |
HB [auth BS] | Ribosomal_L18A | e7o80BS2 | A: a+b two layers | X: GP2-like | H: RplX-like (From Topology) | T: RplX-like | F: Ribosomal_L18A | ECOD (1.6) |
IB [auth BT] | Ribosomal_L21e | e7o80BT1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L21e | ECOD (1.6) |
JB [auth BU] | Ribosomal_L22e | e7o80BU1 | A: a+b two layers | X: Ribosomal protein L22e (From Topology) | H: Ribosomal protein L22e (From Topology) | T: Ribosomal protein L22e | F: Ribosomal_L22e | ECOD (1.6) |
KB [auth BV] | Ribosomal_L14 | e7o80BV1 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: Ribosomal_L14 | ECOD (1.6) |
LB [auth BW] | Ribosomal_L24e | e7o80BW1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: Ribosomal_L24e | ECOD (1.6) |
MB [auth BX] | Ribosomal_L23_3 | e7o80BX1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: Ribosomal_L23_3 | ECOD (1.6) |
NB [auth BY] | Ribosomal_L26 | e7o80BY1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L26 | ECOD (1.6) |
OB [auth BZ] | Ribosomal_L27e | e7o80BZ1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L27e | ECOD (1.6) |
PB [auth Ba] | Ribosomal_L18 | e7o80Ba1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: Ribosomal_L18 | ECOD (1.6) |
QB [auth Bb] | Ribosomal_L29e | e7o80Bb1 | A: extended segments | X: RPL29 (From Topology) | H: RPL29 (From Topology) | T: RPL29 | F: Ribosomal_L29e | ECOD (1.6) |
G [auth AF] | DUF1899 | e7o80AF1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: DUF1899 | ECOD (1.6) |
RB [auth Bc] | Ribosomal_L7Ae | e7o80Bc1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: L30e-like (From Topology) | T: L30e-like | F: Ribosomal_L7Ae | ECOD (1.6) |
SB [auth Bd] | Ribosomal_L31e | e7o80Bd1 | A: a+b two layers | X: Ribosomal protein L31e-like | H: Ribosomal protein L31e/gp120 outer domain (From Topology) | T: Ribosomal protein L31e/gp120 outer domain | F: Ribosomal_L31e | ECOD (1.6) |
TB [auth Be] | Ribosomal_L32e | e7o80Be1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L32e (From Topology) | T: Ribosomal protein L32e | F: Ribosomal_L32e | ECOD (1.6) |
UB [auth Bf] | Ribosomal_L35Ae | e7o80Bf1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Ribosomal_L35Ae | ECOD (1.6) |
VB [auth Bg] | Ribosomal_L34e | e7o80Bg1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: RPL34 (From Topology) | T: RPL34 | F: Ribosomal_L34e | ECOD (1.6) |
WB [auth Bh] | Ribosomal_L29_2 | e7o80Bh1 | A: alpha bundles | X: Long alpha-hairpin | H: Ribosomal protein L29 (L29p) (From Topology) | T: Ribosomal protein L29 (L29p) | F: Ribosomal_L29_2 | ECOD (1.6) |
XB [auth Bi] | Ribosomal_L36e | e7o80Bi1 | A: alpha arrays | X: 60S ribosomal protein rpL36 (L36e) (From Topology) | H: 60S ribosomal protein rpL36 (L36e) (From Topology) | T: 60S ribosomal protein rpL36 (L36e) | F: Ribosomal_L36e | ECOD (1.6) |
YB [auth Bj] | Ribosomal_L37e | e7o80Bj1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L37e | ECOD (1.6) |
ZB [auth Bk] | Ribosomal_L38e | e7o80Bk1 | A: a+b two layers | X: SRP9/14-like | H: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology) | T: Signal recognition particle alu RNA binding heterodimer SRP9/14-related | F: Ribosomal_L38e | ECOD (1.6) |
AC [auth Bl] | Ribosomal_L39 | e7o80Bl1 | A: extended segments | X: Ribosomal protein L39e (From Topology) | H: Ribosomal protein L39e (From Topology) | T: Ribosomal protein L39e | F: Ribosomal_L39 | ECOD (1.6) |
H [auth AG] | Ribosomal_S14_2 | e7o80AG1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: Ribosomal_S14_2 | ECOD (1.6) |
BC [auth Bm] | Ribosomal_L40e | e7o80Bm1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L40e | ECOD (1.6) |
CC [auth Bo] | Ribosomal_L44 | e7o80Bo1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L44 | ECOD (1.6) |
DC [auth Bp] | Ribosomal_L37ae | e7o80Bp1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L37ae | ECOD (1.6) |
EC [auth Br] | Ribosomal_L28e | e7o80Br1 | A: a+b two layers | X: RPL28 (From Topology) | H: RPL28 (From Topology) | T: RPL28 | F: Ribosomal_L28e | ECOD (1.6) |
FC [auth Bs] | Ribosomal_L10 | e7o80Bs2 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein L10-like (From Topology) | T: Ribosomal protein L10-like | F: Ribosomal_L10 | ECOD (1.6) |
FC [auth Bs] | Ribosomal_P0_L10e | e7o80Bs1 | A: a+b two layers | X: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology) | H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology) | T: Insertion domain in 60S ribosomal protein rpP0 (L10P) | F: Ribosomal_P0_L10e | ECOD (1.6) |
GC [auth Bt] | Ribosomal_L11 | e7o80Bt1 | A: alpha arrays | X: HTH | H: HTH | T: Ribosomal protein L11, C-terminal domain | F: Ribosomal_L11 | ECOD (1.6) |
GC [auth Bt] | Ribosomal_L11_N | e7o80Bt2 | A: a+b two layers | X: Ribosomal protein L11/L12e N-terminal domain-like | H: Ribosomal protein L11/L12e N-terminal domain (From Topology) | T: Ribosomal protein L11/L12e N-terminal domain | F: Ribosomal_L11_N | ECOD (1.6) |
HC [auth Bv] | Ribosomal_L1_2nd_1 | e7o80Bv1 | A: a+b two layers | X: a+b domain in Ribosomal protein L1 (From Topology) | H: a+b domain in Ribosomal protein L1 (From Topology) | T: a+b domain in Ribosomal protein L1 | F: Ribosomal_L1_2nd_1 | ECOD (1.6) |
HC [auth Bv] | Ribosomal_L1_1st_1 | e7o80Bv2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Rossmann-like domain in Ribosomal protein L1 (From Topology) | T: Rossmann-like domain in Ribosomal protein L1 | F: Ribosomal_L1_1st_1 | ECOD (1.6) |
IC [auth By] | eRF1_3 | e7o80By1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: L30e-like (From Topology) | T: L30e-like | F: eRF1_3 | ECOD (1.6) |
IC [auth By] | eRF1_1_1 | e7o80By2 | A: a+b three layers | X: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 (From Topology) | H: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 (From Topology) | T: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | F: eRF1_1_1 | ECOD (1.6) |
IC [auth By] | eRF1_2 | e7o80By3 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: eRF1_2 | ECOD (1.6) |
JC [auth Bz] | RLI | e7o80Bz3 | A: a+b two layers | X: 4Fe-4S ferredoxin (From Topology) | H: 4Fe-4S ferredoxin (From Topology) | T: 4Fe-4S ferredoxin | F: RLI | ECOD (1.6) |
JC [auth Bz] | ABC_tran | e7o80Bz2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_tran | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
A [auth A2] | 4AC | |
A [auth A2] | 6MZ | Parent Component: A |
A [auth A2] | A2M | Parent Component: A |
A [auth A2] | B8N | |
A [auth A2] | G7M | Parent Component: G |
A [auth A2] | MA6 | Parent Component: A |
A [auth A2] | OMC | Parent Component: C |
A [auth A2] | OMG | Parent Component: G |
A [auth A2] | OMU | Parent Component: U |
A [auth A2] | PSU | Parent Component: U |
K [auth AT] | 5MU | Parent Component: U |
K [auth AT] | PSU | Parent Component: U |
L [auth AZ] | SAC | Parent Component: SER |
DA [auth Ar] | SAC | Parent Component: SER |
EA [auth As] | NMM | Parent Component: ARG |
GA [auth Au] | AME | Parent Component: MET |
IA [auth Aw] | HY3 | Parent Component: PRO :  AA0029 :  3-hydroxy-L-proline MOD:00038 |
MA [auth B5] | 1MA | Parent Component: A :  AA0029 |
MA [auth B5] | 5MC | Parent Component: C :  AA0029 |
MA [auth B5] | 6MZ | Parent Component: A :  AA0029 |
MA [auth B5] | A2M | Parent Component: A :  AA0029 |
MA [auth B5] | OMC | Parent Component: C :  AA0029 |
MA [auth B5] | OMG | Parent Component: G :  AA0029 |
MA [auth B5] | OMU | Parent Component: U :  AA0029 |
MA [auth B5] | PSU | Parent Component: U :  AA0029 |
MA [auth B5] | UR3 | Parent Component: U :  AA0029 |
MA [auth B5] | UY1 | AA0029 | : 
OA [auth B8] | OMG | Parent Component: G :  AA0029 |
OA [auth B8] | PSU | Parent Component: U :  AA0029 |
PA [auth BA] | V5N | Parent Component: HIS :  AA0029 |
QA [auth BB] | HIC | Parent Component: HIS :  AA0029 , AA0317 :  3-hydroxy-L-proline MOD:00038 , 1'-methyl-L-histidine MOD:00322 |
RA [auth BC] | AYA | Parent Component: ALA :  AA0029 , AA0317 |
SA [auth BD] | AAC | AA0029 , AA0317 | : 
PB [auth Ba] | V5N | Parent Component: HIS :  AA0029 , AA0317 |
QB [auth Bb] | MLZ | Parent Component: LYS :  AA0029 , AA0317 , AA0076 :  3-hydroxy-L-proline MOD:00038 , 1'-methyl-L-histidine MOD:00322 , N6-methyl-L-lysine MOD:00085 |
BC [auth Bm] | M3L | Parent Component: LYS :  AA0029 , AA0317 , AA0076 , AA0074 :  3-hydroxy-L-proline MOD:00038 , 1'-methyl-L-histidine MOD:00322 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 |
CC [auth Bo] | MLZ | Parent Component: LYS :  AA0029 , AA0317 , AA0076 , AA0074 , AA0076 :  3-hydroxy-L-proline MOD:00038 , 1'-methyl-L-histidine MOD:00322 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6-methyl-L-lysine MOD:00085 |
EC [auth Br] | SAC | Parent Component: SER :  AA0029 , AA0317 , AA0076 , AA0074 , AA0076 |