7O80

Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth AB]SCOP2B SuperfamilyNucleic acid-binding proteins 8095265 3000135 SCOP2B (2022-06-29)
E [auth AD]SCOP2B SuperfamilyRibosomal protein S30e-like 8053455 3002190 SCOP2B (2022-06-29)
H [auth AG]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052584 3000068 SCOP2B (2022-06-29)
L [auth AZ]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8097826 3001397 SCOP2B (2022-06-29)
M [auth Aa]SCOP2B SuperfamilyRibosomal S3Ae-like 8053216 3002166 SCOP2B (2022-06-29)
Q [auth Ae]SCOP2B SuperfamilyRibosomal protein S7 8066001 3000799 SCOP2B (2022-06-29)
T [auth Ah]SCOP2B Superfamily50S Ribosomal protein L14-like 8053075 3000433 SCOP2B (2022-06-29)
V [auth Aj]SCOP2B SuperfamilyWinged helix DNA-binding domain 8055720 3000034 SCOP2B (2022-06-29)
W [auth Ak]SCOP2B SuperfamilyNucleic acid-binding proteins 8052707 3000135 SCOP2B (2022-06-29)
W [auth Ak]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052708 3002138 SCOP2B (2022-06-29)
X [auth Al]SCOP2B SuperfamilyL30e-like 8063980 3001739 SCOP2B (2022-06-29)
Y [auth Am]SCOP2B SuperfamilyHomeodomain-like 8052970 3000001 SCOP2B (2022-06-29)
Y [auth Am]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052971 3001284 SCOP2B (2022-06-29)
Z [auth An]SCOP2B SuperfamilyTranslational machinery components 8097824 3000571 SCOP2B (2022-06-29)
BA [auth Ap]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082683 3000100 SCOP2B (2022-06-29)
DA [auth Ar]SCOP2B SuperfamilyS13-like H2TH domain 8101439 3000053 SCOP2B (2022-06-29)
FA [auth At]SCOP2B SuperfamilyRibosomal protein S10 8097814 3001336 SCOP2B (2022-06-29)
HA [auth Av]SCOP2B SuperfamilyRibosomal protein S8 8079081 3000709 SCOP2B (2022-06-29)
KA [auth Ay]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090991 3000034 SCOP2B (2022-06-29)
QA [auth BB]SCOP2B SuperfamilyTranslational proteins 8078357 3000811 SCOP2B (2022-06-29)
RA [auth BC]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052828 3002143 SCOP2B (2022-06-29)
RA [auth BC]SCOP2B SuperfamilyRibosomal protein L4 8052829 3001146 SCOP2B (2022-06-29)
XA [auth BI]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8097320 3000884 SCOP2B (2022-06-29)
YA [auth BJ]SCOP2B SuperfamilyRL5-like 8073894 3001709 SCOP2B (2022-06-29)
CB [auth BN]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082477 3000210 SCOP2B (2022-06-29)
KB [auth BV]SCOP2B Superfamily50S Ribosomal protein L14-like 8072048 3000433 SCOP2B (2022-06-29)
MB [auth BX]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095966 3000210 SCOP2B (2022-06-29)
NB [auth BY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076754 3000334 SCOP2B (2022-06-29)
OB [auth BZ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053047 3000334 SCOP2B (2022-06-29)
PB [auth Ba]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8097818 3001045 SCOP2B (2022-06-29)
RB [auth Bc]SCOP2B SuperfamilyL30e-like 8094953 3001739 SCOP2B (2022-06-29)
TB [auth Be]SCOP2B SuperfamilyRibosomal protein L32e 8102088 3000982 SCOP2B (2022-06-29)
UB [auth Bf]SCOP2B SuperfamilyTranslational proteins 8093714 3000811 SCOP2B (2022-06-29)
VB [auth Bg]SCOP2B SuperfamilyRibosomal protein L34e-like 8103328 3002203 SCOP2B (2022-06-29)
XB [auth Bi]SCOP2B SuperfamilyRibosomal protein L36e 8053119 3002161 SCOP2B (2022-06-29)
ZB [auth Bk]SCOP2B SuperfamilyRibosomal L38e protein-like 8093716 3002206 SCOP2B (2022-06-29)
AC [auth Bl]SCOP2B SuperfamilyRibosomal protein L39e 8095597 3001756 SCOP2B (2022-06-29)
DC [auth Bp]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101435 3001320 SCOP2B (2022-06-29)
HC [auth Bv]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like 8065344 3001911 SCOP2B (2022-06-29)
JC [auth Bz]SCOP2B Superfamily4Fe-4S ferredoxins 8089857 3000020 SCOP2B (2022-06-29)
JC [auth Bz]SCOP2B SuperfamilyABC transporter-like P-loop ATPases 8089861 3002020 SCOP2B (2022-06-29)
JC [auth Bz]SCOP2B SuperfamilyABC transporter-like P-loop ATPases 8089860 3002020 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth AA]Ribosomal_S27ee7o80AA1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
C [auth AB]Ribosomal_S28ee7o80AB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
D [auth AC]Ribosomal_S27e7o80AC1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
E [auth AD]Ribosomal_S30e7o80AD1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
F [auth AE]Ribosomal_S26ee7o80AE1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
G [auth AF]DUF1899e7o80AF1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: DUF1899ECOD (1.6)
H [auth AG]Ribosomal_S14_2e7o80AG1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
L [auth AZ]Ribosomal_S2_2e7o80AZ1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
M [auth Aa]Ribosomal_S3Ae_Ne7o80Aa1 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
M [auth Aa]Ribosomal_S3Ae_Ce7o80Aa2 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
N [auth Ab]Ribosomal_S5_C_1e7o80Ab1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
N [auth Ab]Ribosomal_S5_3e7o80Ab3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
N [auth Ab]Ribosomal_S5_2e7o80Ab2 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
O [auth Ac]Ribosomal_S3_Ce7o80Ac1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
O [auth Ac]KH_2_3e7o80Ac2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
P [auth Ad]Ribosomal_S4ee7o80Ad1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
P [auth Ad]40S_S4_Ce7o80Ad3 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
P [auth Ad]RS4NTe7o80Ad2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
Q [auth Ae]Ribosomal_S7_1e7o80Ae1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
R [auth Af]Ribosomal_S6ee7o80Af1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
S [auth Ag]Ribosomal_S7e_Ne7o80Ag2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
S [auth Ag]Ribosomal_S7e_C_1e7o80Ag1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_1ECOD (1.6)
T [auth Ah]Ribosomal_S8ee7o80Ah1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
U [auth Ai]S4e7o80Ai1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
V [auth Aj]S10_plectine7o80Aj1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
W [auth Ak]Ribosomal_S17_1e7o80Ak1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
X [auth Al]Ribosomal_L7Aee7o80Al1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
Y [auth Am]Ribosomal_S13_Ne7o80Am2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
Y [auth Am]Ribosomal_S15_2e7o80Am1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
Z [auth An]Ribosomal_S11e7o80An1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
AA [auth Ao]Ribosomal_S19e7o80Ao1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
BA [auth Ap]Ribosomal_S9e7o80Ap1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
CA [auth Aq]Ribosomal_S17ee7o80Aq1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
DA [auth Ar]Ribosomal_S13e7o80Ar1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
EA [auth As]Ribosomal_S19ee7o80As1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
FA [auth At]Ribosomal_S10_1e7o80At1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
GA [auth Au]Ribosomal_S21ee7o80Au1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
HA [auth Av]Ribosomal_S8_N_1e7o80Av2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
HA [auth Av]Ribosomal_S8_C_1e7o80Av1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
IA [auth Aw]Ribosom_S12_S23e7o80Aw1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
JA [auth Ax]Ribosomal_S24ee7o80Ax1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
KA [auth Ay]Ribosomal_S25e7o80Ay1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
LA [auth Az]Ribosomal_L41e7o80Az1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
PA [auth BA]Ribosomal_L2_1e7o80BA2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
PA [auth BA]Ribosomal_L2_C_2e7o80BA1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
QA [auth BB]Ribosomal_L3e7o80BB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
RA [auth BC]Ribosomal_L4e7o80BC2 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
RA [auth BC]Ribos_L4_asso_Ce7o80BC1 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
SA [auth BD]Ribosomal_L5ee7o80BD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
TA [auth BE]Ribosomal_L6ee7o80BE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
UA [auth BF]Ribosomal_L30_1e7o80BF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
VA [auth BG]Ribosomal_L7Ae_1e7o80BG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
WA [auth BH]Ribosomal_L6_2e7o80BH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
WA [auth BH]Ribosomal_L6e7o80BH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
XA [auth BI]Ribosomal_L16e7o80BI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
YA [auth BJ]Ribosomal_L5_Ce7o80BJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
AB [auth BL]Ribosomal_L13ee7o80BL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
BB [auth BM]Ribosomal_L14ee7o80BM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
CB [auth BN]Ribosomal_L15ee7o80BN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
DB [auth BO]Ribosomal_L13e7o80BO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
EB [auth BP]Ribosomal_L22e7o80BP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
FB [auth BQ]Ribosomal_L18e7o80BQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
GB [auth BR]Ribosomal_L19e_Ne7o80BR1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
GB [auth BR]Ribosomal_L19e_Ce7o80BR2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
HB [auth BS]Ribosomal_L18Ae7o80BS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
IB [auth BT]Ribosomal_L21ee7o80BT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
JB [auth BU]Ribosomal_L22ee7o80BU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
KB [auth BV]Ribosomal_L14e7o80BV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
LB [auth BW]Ribosomal_L24ee7o80BW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
MB [auth BX]Ribosomal_L23_3e7o80BX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
NB [auth BY]Ribosomal_L26e7o80BY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
OB [auth BZ]Ribosomal_L27ee7o80BZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
PB [auth Ba]Ribosomal_L18e7o80Ba1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
QB [auth Bb]Ribosomal_L29ee7o80Bb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
RB [auth Bc]Ribosomal_L7Aee7o80Bc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
SB [auth Bd]Ribosomal_L31ee7o80Bd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
TB [auth Be]Ribosomal_L32ee7o80Be1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
UB [auth Bf]Ribosomal_L35Aee7o80Bf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
VB [auth Bg]Ribosomal_L34ee7o80Bg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
WB [auth Bh]Ribosomal_L29_2e7o80Bh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
XB [auth Bi]Ribosomal_L36ee7o80Bi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
YB [auth Bj]Ribosomal_L37ee7o80Bj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
ZB [auth Bk]Ribosomal_L38ee7o80Bk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
AC [auth Bl]Ribosomal_L39e7o80Bl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
BC [auth Bm]Ribosomal_L40ee7o80Bm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
CC [auth Bo]Ribosomal_L44e7o80Bo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
DC [auth Bp]Ribosomal_L37aee7o80Bp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
EC [auth Br]Ribosomal_L28ee7o80Br1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: Ribosomal_L28eECOD (1.6)
FC [auth Bs]Ribosomal_L10e7o80Bs2 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
FC [auth Bs]Ribosomal_P0_L10ee7o80Bs1 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: Ribosomal_P0_L10eECOD (1.6)
GC [auth Bt]Ribosomal_L11e7o80Bt1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
GC [auth Bt]Ribosomal_L11_Ne7o80Bt2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
HC [auth Bv]Ribosomal_L1_2nd_1e7o80Bv1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
HC [auth Bv]Ribosomal_L1_1st_1e7o80Bv2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1st_1ECOD (1.6)
IC [auth By]eRF1_3e7o80By1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: eRF1_3ECOD (1.6)
IC [auth By]eRF1_1_1e7o80By2 A: a+b three layersX: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 (From Topology)H: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 (From Topology)T: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1F: eRF1_1_1ECOD (1.6)
IC [auth By]eRF1_2e7o80By3 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: eRF1_2ECOD (1.6)
JC [auth Bz]RLIe7o80Bz3 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: RLIECOD (1.6)
JC [auth Bz]ABC_trane7o80Bz2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ABC_tranECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth AA]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
C [auth AB]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
D [auth AC]PF07650KH domain (KH_2)KH domain- Domain
D [auth AC]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
D [auth AC]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
F [auth AE]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
G [auth AF]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
G [auth AF]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
H [auth AG]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
J [auth AI]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
K [auth AT]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
L [auth AZ]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
L [auth AZ]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
L [auth AZ]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
PA [auth BA]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
QA [auth BB]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
RA [auth BC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
RA [auth BC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
RA [auth BC]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
SA [auth BD]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
TA [auth BE]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
TA [auth BE]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
UA [auth BF]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
WA [auth BH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
WA [auth BH]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
XA [auth BI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
XA [auth BI]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
YA [auth BJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
YA [auth BJ]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
YA [auth BJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
AB [auth BL]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
BB [auth BM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
CB [auth BN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
DB [auth BO]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
EB [auth BP]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
EB [auth BP]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
GB [auth BR]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
HB [auth BS]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1].Domain
HB [auth BS]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
IB [auth BT]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
IB [auth BT]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
KB [auth BV]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
KB [auth BV]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
LB [auth BW]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
MB [auth BX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
NB [auth BY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
NB [auth BY]PF03463eRF1 domain 1 (eRF1_1)eRF1 domain 1The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The o ...The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site [1]. This family also includes other proteins for which the precise molecular function is unknown. Many of them are from Archaebacteria. These proteins may also be involved in translation termination but this awaits experimental verification.
Domain
NB [auth BY]PF03464eRF1 domain 2 (eRF1_2)eRF1 domain 2The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The o ...The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site [1]. This family also includes other proteins for which the precise molecular function is unknown. Many of them are from Archaebacteria. These proteins may also be involved in translation termination but this awaits experimental verification.
Domain
NB [auth BY]PF00467KOW motif (KOW)KOW motif- Family
OB [auth BZ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
OB [auth BZ]PF04068Possible Fer4-like domain in RNase L inhibitor, RLI (RLI)Possible Fer4-like domain in RNase L inhibitor, RLI- Family
OB [auth BZ]PF000374Fe-4S binding domain (Fer4)4Fe-4S binding domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich.Domain
OB [auth BZ]PF00005ABC transporter (ABC_tran)ABC transporterABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ...ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are composed of two copies of this domain and two copies of a transmembrane domain Pfam:PF00664. These four domains may belong to a single polypeptide as in Swiss:P13569, or belong in different polypeptide chains.
Domain
OB [auth BZ]PF00467KOW motif (KOW)KOW motif- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth A2]18S rRNA---
B [auth AA]40S ribosomal protein S27
C [auth AB]Ribosomal protein S28
D [auth AC]Ribosomal protein S27a
E [auth AD]40S ribosomal protein S30
F [auth AE]Ribosomal protein eS26---
G [auth AF]RACK1
H [auth AG]uS14
I [auth AH]mRNA containing SARS-CoV-2 sequence---
J [auth AI]E-site tRNA---
K [auth AT]P-site Leu-tRNA(Leu)---
L [auth AZ]40S ribosomal protein SA
M [auth Aa]40S ribosomal protein S3a
N [auth Ab]Ribosomal protein uS5---
O [auth Ac]40S ribosomal protein S3
P [auth Ad]Ribosomal protein eS4---
Q [auth Ae]Ribosomal protein S5
R [auth Af]40S ribosomal protein S6
S [auth Ag]40S ribosomal protein S7
T [auth Ah]40S ribosomal protein S8
U [auth Ai]Ribosomal protein S9 (Predicted)
V [auth Aj]Ribosomal protein eS10 -
W [auth Ak]40S ribosomal protein S11
X [auth Al]40S ribosomal protein S12
Y [auth Am]uS15
Z [auth An]40S ribosomal protein uS11
AA [auth Ao]40S ribosomal protein uS19
BA [auth Ap]Ribosomal protein S16
CA [auth Aq]40S ribosomal protein eS17
DA [auth Ar]40S ribosomal protein S18
EA [auth As]Ribosomal protein eS19---
FA [auth At]40S ribosomal protein uS10
GA [auth Au]Ribosomal protein eS21---
HA [auth Av]Ribosomal protein S15a
IA [auth Aw]40S ribosomal protein S23
JA [auth Ax]40S ribosomal protein S24
KA [auth Ay]40S ribosomal protein S25
LA [auth Az]60s ribosomal protein l41
MA [auth B5]28S rRNA---
NA [auth B7]5S rRNA---
OA [auth B8]5.8S rRNA---
PA [auth BA]Ribosomal protein uL2---
QA [auth BB]Ribosomal protein L3
RA [auth BC]60S ribosomal protein L4
SA [auth BD]Ribosomal_L18_c domain-containing protein
TA [auth BE]60S ribosomal protein L6
UA [auth BF]Ribosomal Protein uL30---
VA [auth BG]Ribosomal protein eL8---
WA [auth BH]60S ribosomal protein L9
XA [auth BI]60S ribosomal protein L10
YA [auth BJ]Ribosomal protein L11
ZA [auth BK]Replicase polyprotein 1ab
AB [auth BL]Ribosomal protein eL13---
BB [auth BM]Ribosomal protein L14
CB [auth BN]Ribosomal protein L15
DB [auth BO]Ribosomal protein L13a---
EB [auth BP]uL22
FB [auth BQ]Ribosomal protein L18---
GB [auth BR]60S ribosomal protein L19
HB [auth BS]Ribosomal protein L18a---
IB [auth BT]eL21
JB [auth BU]Ribosomal protein eL22---
KB [auth BV]Ribosomal protein L23
LB [auth BW]eL24
MB [auth BX]uL23
NB [auth BY]Ribosomal protein L26
OB [auth BZ]60S ribosomal protein L27
PB [auth Ba]60S ribosomal protein L27a
QB [auth Bb]60S ribosomal protein L29
RB [auth Bc]eL30
SB [auth Bd]eL31
TB [auth Be]eL32
UB [auth Bf]eL33
VB [auth Bg]60S ribosomal protein L34
WB [auth Bh]uL29
XB [auth Bi]60S ribosomal protein L36
YB [auth Bj]Ribosomal protein L37
ZB [auth Bk]eL38
AC [auth Bl]eL39
BC [auth Bm]60S ribosomal protein L40---
CC [auth Bo]eL42
DC [auth Bp]eL43
EC [auth Br]Ribosomal protein eL28---
FC [auth Bs]60S acidic ribosomal protein P0
GC [auth Bt]Ribosomal protein L12
HC [auth Bv]Ribosomal protein
IC [auth By]Eukaryotic peptide chain release factor subunit 1
JC [auth Bz]ATP binding cassette subfamily E member 1 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth AA]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
B [auth AA]IPR000592Small ribosomal subunit protein eS27Family
B [auth AA]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
C [auth AB]IPR028626Ribosomal protein eS28 conserved siteConserved Site
C [auth AB]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth AB]IPR000289Small ribosomal subunit protein eS28Family
D [auth AC]IPR019954Ubiquitin conserved siteConserved Site
D [auth AC]IPR000626Ubiquitin-like domainDomain
D [auth AC]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
D [auth AC]IPR002906Small ribosomal subunit protein eS31Domain
D [auth AC]IPR019956Ubiquitin domainDomain
D [auth AC]IPR050158Ubiquitin and ubiquitin-likeFamily
D [auth AC]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
D [auth AC]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
E [auth AD]IPR039415Ubiquitin-like protein FUBIDomain
E [auth AD]IPR019956Ubiquitin domainDomain
E [auth AD]IPR019954Ubiquitin conserved siteConserved Site
E [auth AD]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
E [auth AD]IPR000626Ubiquitin-like domainDomain
E [auth AD]IPR006846Small ribosomal subunit protein eS30Family
G [auth AF]IPR019775WD40 repeat, conserved siteConserved Site
G [auth AF]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
G [auth AF]IPR045223Small ribosomal subunit protein RACK1-likeFamily
G [auth AF]IPR001680WD40 repeatRepeat
G [auth AF]IPR020472G-protein beta WD-40 repeatRepeat
G [auth AF]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
H [auth AG]IPR001209Small ribosomal subunit protein uS14Family
H [auth AG]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
H [auth AG]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
H [auth AG]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
L [auth AZ]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
L [auth AZ]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
L [auth AZ]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
L [auth AZ]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
L [auth AZ]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
L [auth AZ]IPR001865Small ribosomal subunit protein uS2Family
L [auth AZ]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
M [auth Aa]IPR001593Small ribosomal subunit protein eS1Family
M [auth Aa]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
M [auth Aa]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
O [auth Ac]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
O [auth Ac]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
O [auth Ac]IPR004044K Homology domain, type 2Domain
O [auth Ac]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
O [auth Ac]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
O [auth Ac]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
O [auth Ac]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
Q [auth Ae]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
Q [auth Ae]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
Q [auth Ae]IPR000235Small ribosomal subunit protein uS7Family
Q [auth Ae]IPR023798Small ribosomal subunit protein uS7 domainDomain
Q [auth Ae]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
R [auth Af]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
R [auth Af]IPR001377Small ribosomal subunit protein eS6Family
R [auth Af]IPR014401Small ribosomal subunit protein eS6-likeFamily
S [auth Ag]IPR000554Small ribosomal subunit protein eS7Family
S [auth Ag]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
T [auth Ah]IPR001047Small ribosomal subunit protein eS8Family
T [auth Ah]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
T [auth Ah]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
T [auth Ah]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
U [auth Ai]IPR002942RNA-binding S4 domainDomain
U [auth Ai]IPR022801Small ribosomal subunit protein uS4Family
U [auth Ai]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
U [auth Ai]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
U [auth Ai]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
U [auth Ai]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
V [auth Aj]IPR037447Small ribosomal subunit protein eS10Family
V [auth Aj]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
V [auth Aj]IPR005326Plectin/eS10, N-terminalDomain
W [auth Ak]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
W [auth Ak]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
W [auth Ak]IPR000266Small ribosomal subunit protein uS17Family
W [auth Ak]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
W [auth Ak]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
X [auth Al]IPR000530Small ribosomal subunit protein eS12Family
X [auth Al]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
X [auth Al]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
X [auth Al]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
Y [auth Am]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
Y [auth Am]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
Y [auth Am]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
Y [auth Am]IPR000589Small ribosomal subunit protein uS15Family
Z [auth An]IPR001971Small ribosomal subunit protein uS11Family
Z [auth An]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
Z [auth An]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
AA [auth Ao]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
AA [auth Ao]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
AA [auth Ao]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
AA [auth Ao]IPR002222Small ribosomal subunit protein uS19Family
BA [auth Ap]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
BA [auth Ap]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
BA [auth Ap]IPR000754Small ribosomal subunit protein uS9Family
BA [auth Ap]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
CA [auth Aq]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
CA [auth Aq]IPR001210Small ribosomal subunit protein eS17Family
CA [auth Aq]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
DA [auth Ar]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
DA [auth Ar]IPR001892Small ribosomal subunit protein uS13Family
DA [auth Ar]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
DA [auth Ar]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
FA [auth At]IPR001848Small ribosomal subunit protein uS10Family
FA [auth At]IPR027486Small ribosomal subunit protein uS10 domainDomain
FA [auth At]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
FA [auth At]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
FA [auth At]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
HA [auth Av]IPR000630Small ribosomal subunit protein uS8Family
HA [auth Av]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
HA [auth Av]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
IA [auth Aw]IPR006032Small ribosomal subunit protein uS12Family
IA [auth Aw]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IA [auth Aw]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
JA [auth Ax]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
JA [auth Ax]IPR001976Small ribosomal subunit protein eS24Family
JA [auth Ax]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
JA [auth Ax]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
KA [auth Ay]IPR004977Small ribosomal subunit protein eS25Family
KA [auth Ay]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
LA [auth Az]IPR007836Large ribosomal subunit protein eS32Family
QA [auth BB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
QA [auth BB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
QA [auth BB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
QA [auth BB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
QA [auth BB]IPR000597Large ribosomal subunit protein uL3Family
RA [auth BC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
RA [auth BC]IPR002136Large ribosomal subunit protein uL4Family
RA [auth BC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
RA [auth BC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
RA [auth BC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
SA [auth BD]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
SA [auth BD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
TA [auth BE]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
TA [auth BE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
TA [auth BE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
TA [auth BE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
TA [auth BE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
TA [auth BE]IPR000915Large ribosomal subunit protein eL6Family
WA [auth BH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
WA [auth BH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
WA [auth BH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
WA [auth BH]IPR000702Large ribosomal subunit protein uL6-likeFamily
XA [auth BI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
XA [auth BI]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
XA [auth BI]IPR016180Large ribosomal subunit protein uL16 domainDomain
XA [auth BI]IPR047873Large ribosomal subunit protein uL16Family
XA [auth BI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
YA [auth BJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
YA [auth BJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
YA [auth BJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
YA [auth BJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
YA [auth BJ]IPR002132Large ribosomal subunit protein uL5Family
ZA [auth BK]IPR022733DPUP/SUD, C-terminal, betacoronavirusDomain
ZA [auth BK]IPR042515Non-structural protein NSP15, N-terminal domain superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR043174Non-structural protein NSP15, middle domain superfamilyHomologous Superfamily
ZA [auth BK]IPR044315Nonstructural protein 14, betacoronavirusDomain
ZA [auth BK]IPR038123Non-structural protein NSP4, C-terminal superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR042570Non-structural protein NSP3, nucleic acid-binding domain superfamily, betacoronavirusHomologous Superfamily
ZA [auth BK]IPR043178Papain-like protease, thumb domain superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR046441RNA-dependent RNA polymerase, coronavirusDomain
ZA [auth BK]IPR044863Nidovirus RdRp-associated nucleotidyl transferase (NiRAN) domainDomain
ZA [auth BK]IPR044343Nonstructural protein 13, 1B domain, coronavirusDomain
ZA [auth BK]IPR038166Polyprotein cleavage domain PL2pro superfamily, betacoronavirusHomologous Superfamily
ZA [auth BK]IPR037227Endoribonuclease EndoU-likeHomologous Superfamily
ZA [auth BK]IPR027352Nonstructural protein 13, zinc-binding domain, coronavirus-likeDomain
ZA [auth BK]IPR009003Peptidase S1, PA clanHomologous Superfamily
ZA [auth BK]IPR013016Peptidase C16, coronavirusDomain
ZA [auth BK]IPR009466Non-structural protein 14, coronavirusDomain
ZA [auth BK]IPR044357NSP3, first ubiquitin-like (Ubl) domain, coronavirusDomain
ZA [auth BK]IPR046436Nidovirus 3'-5' exoribonuclease domainDomain
ZA [auth BK]IPR047570NSP12, interface domain, coronavirusDomain
ZA [auth BK]IPR018995RNA synthesis protein NSP10, coronavirusDomain
ZA [auth BK]IPR043615Nonstructural protein 2, N-terminal domain, coronavirusDomain
ZA [auth BK]IPR050534Coronaviruses polyprotein 1abFamily
ZA [auth BK]IPR043177Papain-like protease, N-terminal domain superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR043606Coronavirus replicase NSP15, N-terminal oligomerizationDomain
ZA [auth BK]IPR044330Nonstructural protein 15, N-terminal domain, alpha/beta-coronavirusDomain
ZA [auth BK]IPR041679DNA2/NAM7 helicase-like, C-terminalDomain
ZA [auth BK]IPR024375Non-structural protein NSP3, SUD-M domain, betacoronavirusDomain
ZA [auth BK]IPR014828Non-structural protein NSP7, coronavirusDomain
ZA [auth BK]IPR043503Papain-like viral protease, palm and finger domains, coronavirusHomologous Superfamily
ZA [auth BK]IPR014829Non-structural protein NSP8, coronavirusDomain
ZA [auth BK]IPR036499Non-structural protein NSP9 superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
ZA [auth BK]IPR044389Non-structural protein 2, SARS-CoV-likeDomain
ZA [auth BK]IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
ZA [auth BK]IPR008740Peptidase C30, coronavirusDomain
ZA [auth BK]IPR036333RNA synthesis protein NSP10 superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR047573Non-structural protein 2, middle domain, coronavirusDomain
ZA [auth BK]IPR049894Coronavirus NSP3, 3Ecto domainDomain
ZA [auth BK]IPR043472Macro domain-likeHomologous Superfamily
ZA [auth BK]IPR043609NendoU domain, nidovirusDomain
ZA [auth BK]IPR032592Non-structural protein NSP3, nucleic acid-binding domain, betacoronavirusDomain
ZA [auth BK]IPR043613Non-structural protein 2, C-terminal domain, coronavirusDomain
ZA [auth BK]IPR038083Non-structural protein NSP3A domain-like superfamilyHomologous Superfamily
ZA [auth BK]IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
ZA [auth BK]IPR044351RNA-dependent RNA polymerase, SARS-CoV-likeDomain
ZA [auth BK]IPR024358Non-structural protein NSP3, N-terminal, betacoronavirusDomain
ZA [auth BK]IPR048673Nonstructural protein 13, stalk domain, coronavirusDomain
ZA [auth BK]IPR046435NSP14, guanine-N7-methyltransferase domain, coronavirusDomain
ZA [auth BK]IPR009469RNA-dependent RNA polymerase, N-terminal, coronavirusDomain
ZA [auth BK]IPR043611Coronavirus replicase NSP3, C-terminalDomain
ZA [auth BK]IPR044864Non-structural protein NSP3, SUD-N (Mac2) domain, betacoronavirusDomain
ZA [auth BK]IPR047566Coronavirus replicase NSP3, Y domainDomain
ZA [auth BK]IPR048672Nonstructural protein 13, zinc-binding domain, coronavirusDomain
ZA [auth BK]IPR043612Non-structural protein NSP4, N-terminal, coronavirusDomain
ZA [auth BK]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
ZA [auth BK]IPR043608Nonstructural protein 15, middle domain, coronavirusDomain
ZA [auth BK]IPR044353NSP3, second ubiquitin-like (Ubl) domain, coronavirusDomain
ZA [auth BK]IPR037204Non-structural protein NSP7 superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR046443NSP1, globular domain, alpha/betacoronavirusDomain
ZA [auth BK]IPR043610Non-structural protein 6, coronavirusDomain
ZA [auth BK]IPR027351(+) RNA virus helicase core domainDomain
ZA [auth BK]IPR044322Nonstructural protein 15, middle domain, alpha/betacoronavirusDomain
ZA [auth BK]IPR009461Non-structural protein NSP16, coronavirus-likeDomain
ZA [auth BK]IPR043477Peptidase C30, domain 3, coronavirusHomologous Superfamily
ZA [auth BK]IPR043478Non-structural protein NSP3, SUD-N (Mac2) domain superfamily, betacoronavirusHomologous Superfamily
ZA [auth BK]IPR038400Non-structural protein NSP3, SUD-M domain superfamily, betacoronavirusHomologous Superfamily
ZA [auth BK]IPR046442NSP1, C-terminal domain, betacoronavirusDomain
ZA [auth BK]IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
ZA [auth BK]IPR044401NSP15, NendoU domain, coronavirusDomain
ZA [auth BK]IPR014822Non-structural protein NSP9, coronavirusDomain
ZA [auth BK]IPR038030NSP1 globular domain superfamily, betacoronavirusHomologous Superfamily
ZA [auth BK]IPR021590NSP1, globular domain, betacoronavirusDomain
ZA [auth BK]IPR044367Non-structural protein 6, betacoronavirusDomain
ZA [auth BK]IPR037230Non-structural protein NSP8 superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR046440Arterivirus Nsp11 N-terminal/Coronavirus NSP15 middle domainDomain
ZA [auth BK]IPR032505Non-structural protein NSP4, C-terminal, coronavirusDomain
ZA [auth BK]IPR046438Nidovirus 2-O-methyltransferaseDomain
ZA [auth BK]IPR002589Macro domainDomain
ZA [auth BK]IPR047567Non-structural protein NSP3, group 2-specific marker domain, betacoronavirusDomain
ZA [auth BK]IPR044371Non-structural protein 3, X-domain-likeDomain
ZA [auth BK]IPR007094RNA-directed RNA polymerase, catalytic domainDomain
BB [auth BM]IPR039660Large ribosomal subunit protein eL14Family
BB [auth BM]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
BB [auth BM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
BB [auth BM]IPR002784Large ribosomal subunit protein eL14 domainDomain
BB [auth BM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CB [auth BN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
CB [auth BN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
CB [auth BN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
CB [auth BN]IPR000439Large ribosomal subunit protein eL15Family
EB [auth BP]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
EB [auth BP]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
EB [auth BP]IPR001063Large ribosomal subunit protein uL22Family
EB [auth BP]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
GB [auth BR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
GB [auth BR]IPR039547Large ribosomal subunit protein eL19Family
GB [auth BR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
GB [auth BR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
GB [auth BR]IPR000196Large ribosomal subunit protein eL19 domainDomain
GB [auth BR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
IB [auth BT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
IB [auth BT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
IB [auth BT]IPR001147Large ribosomal subunit protein eL21Family
IB [auth BT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
KB [auth BV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
KB [auth BV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
KB [auth BV]IPR000218Large ribosomal subunit protein uL14Family
LB [auth BW]IPR011017TRASH domainDomain
LB [auth BW]IPR000988Large ribosomal subunit protein eL24-relatedFamily
LB [auth BW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
LB [auth BW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
MB [auth BX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
MB [auth BX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
MB [auth BX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
MB [auth BX]IPR019985Large ribosomal subunit protein uL23Family
MB [auth BX]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
MB [auth BX]IPR013025Large ribosomal subunit protein uL23-likeFamily
NB [auth BY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
NB [auth BY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NB [auth BY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
NB [auth BY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
NB [auth BY]IPR005824KOWDomain
NB [auth BY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
OB [auth BZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
OB [auth BZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
OB [auth BZ]IPR001141Large ribosomal subunit protein eL27Family
OB [auth BZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
OB [auth BZ]IPR005824KOWDomain
OB [auth BZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
PB [auth Ba]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
PB [auth Ba]IPR021131Large ribosomal subunit protein uL15/eL18Domain
PB [auth Ba]IPR030878Large ribosomal subunit protein uL15Family
PB [auth Ba]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
PB [auth Ba]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
QB [auth Bb]IPR002673Large ribosomal subunit protein eL29Family
RB [auth Bc]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
RB [auth Bc]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
RB [auth Bc]IPR000231Large ribosomal subunit protein eL30Family
RB [auth Bc]IPR039109Large ribosomal subunit protein eL30-likeFamily
RB [auth Bc]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
SB [auth Bd]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
SB [auth Bd]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
SB [auth Bd]IPR000054Large ribosomal subunit protein eL31Family
TB [auth Be]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
TB [auth Be]IPR001515Large ribosomal subunit protein eL32Family
TB [auth Be]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
UB [auth Bf]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
UB [auth Bf]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
UB [auth Bf]IPR001780Large ribosomal subunit protein eL33Family
UB [auth Bf]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
VB [auth Bg]IPR008195Large ribosomal subunit protein eL34Family
VB [auth Bg]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
WB [auth Bh]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
WB [auth Bh]IPR001854Large ribosomal subunit protein uL29Family
WB [auth Bh]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
WB [auth Bh]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
XB [auth Bi]IPR000509Large ribosomal subunit protein eL36Family
XB [auth Bi]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
YB [auth Bj]IPR001569Large ribosomal subunit protein eL37Family
YB [auth Bj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
YB [auth Bj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
YB [auth Bj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
ZB [auth Bk]IPR002675Large ribosomal subunit protein eL38Family
ZB [auth Bk]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
AC [auth Bl]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
AC [auth Bl]IPR000077Large ribosomal subunit protein eL39Family
AC [auth Bl]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
CC [auth Bo]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
CC [auth Bo]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
CC [auth Bo]IPR000552Large ribosomal subunit protein eL42Family
DC [auth Bp]IPR002674Large ribosomal subunit protein eL43Family
DC [auth Bp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DC [auth Bp]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
FC [auth Bs]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
FC [auth Bs]IPR001790Large ribosomal subunit protein uL10Family
FC [auth Bs]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
FC [auth Bs]IPR030670Large ribosomal subunit protein uL10, eukaryotesFamily
FC [auth Bs]IPR050323Universal ribosomal protein uL10Family
FC [auth Bs]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
GC [auth Bt]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
GC [auth Bt]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
GC [auth Bt]IPR000911Ribosomal protein uL11Family
GC [auth Bt]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
GC [auth Bt]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
GC [auth Bt]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
HC [auth Bv]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
HC [auth Bv]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
HC [auth Bv]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
HC [auth Bv]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
HC [auth Bv]IPR002143Large ribosomal subunit protein uL1Family
HC [auth Bv]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
IC [auth By]IPR004403Peptide chain release factor eRF1/aRF1Family
IC [auth By]IPR005141eRF1 domain 2Domain
IC [auth By]IPR005140eRF1 domain 1/Pelota-likeDomain
IC [auth By]IPR042226eRF1, domain 2 superfamilyHomologous Superfamily
IC [auth By]IPR024049eRF1, domain 1Homologous Superfamily
IC [auth By]IPR005142eRF1 domain 3Domain
IC [auth By]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
JC [auth Bz]IPR007209RNase L inhibitor RLI-like, possible metal-binding domainDomain
JC [auth Bz]IPR017871ABC transporter-like, conserved siteConserved Site
JC [auth Bz]IPR003439ABC transporter-like, ATP-binding domainDomain
JC [auth Bz]IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
JC [auth Bz]IPR003593AAA+ ATPase domainDomain
JC [auth Bz]IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
JC [auth Bz]IPR013283RLI1Family
JC [auth Bz]IPR034348RLI, domain 1Domain
JC [auth Bz]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A [auth A2]4AC
A [auth A2]6MZ Parent Component: A

A [auth A2]A2M Parent Component: A

A [auth A2]B8N
A [auth A2]G7M Parent Component: G

A [auth A2]MA6 Parent Component: A

A [auth A2]OMC Parent Component: C

A [auth A2]OMG Parent Component: G

A [auth A2]OMU Parent Component: U

A [auth A2]PSU Parent Component: U

K [auth AT]5MU Parent Component: U

K [auth AT]PSU Parent Component: U

L [auth AZ]SAC Parent Component: SER

DA [auth Ar]SAC Parent Component: SER

EA [auth As]NMM Parent Component: ARG

GA [auth Au]AME Parent Component: MET

IA [auth Aw]HY3 Parent Component: PRO

RESIDAA0029

PSI-MOD :  3-hydroxy-L-proline MOD:00038
MA [auth B5]1MA Parent Component: A

RESIDAA0029

MA [auth B5]5MC Parent Component: C

RESIDAA0029

MA [auth B5]6MZ Parent Component: A

RESIDAA0029

MA [auth B5]A2M Parent Component: A

RESIDAA0029

MA [auth B5]OMC Parent Component: C

RESIDAA0029

MA [auth B5]OMG Parent Component: G

RESIDAA0029

MA [auth B5]OMU Parent Component: U

RESIDAA0029

MA [auth B5]PSU Parent Component: U

RESIDAA0029

MA [auth B5]UR3 Parent Component: U

RESIDAA0029

MA [auth B5]UY1 RESIDAA0029

OA [auth B8]OMG Parent Component: G

RESIDAA0029

OA [auth B8]PSU Parent Component: U

RESIDAA0029

PA [auth BA]V5N Parent Component: HIS

RESIDAA0029

QA [auth BB]HIC Parent Component: HIS

RESIDAA0029 , AA0317

PSI-MOD :  3-hydroxy-L-proline MOD:00038 , 1'-methyl-L-histidine MOD:00322
RA [auth BC]AYA Parent Component: ALA

RESIDAA0029 , AA0317

SA [auth BD]AAC RESIDAA0029 , AA0317

PB [auth Ba]V5N Parent Component: HIS

RESIDAA0029 , AA0317

QB [auth Bb]MLZ Parent Component: LYS

RESIDAA0029 , AA0317 , AA0076

PSI-MOD :  3-hydroxy-L-proline MOD:00038 , 1'-methyl-L-histidine MOD:00322 , N6-methyl-L-lysine MOD:00085
BC [auth Bm]M3L Parent Component: LYS

RESIDAA0029 , AA0317 , AA0076 , AA0074

PSI-MOD :  3-hydroxy-L-proline MOD:00038 , 1'-methyl-L-histidine MOD:00322 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083
CC [auth Bo]MLZ Parent Component: LYS

RESIDAA0029 , AA0317 , AA0076 , AA0074 , AA0076

PSI-MOD :  3-hydroxy-L-proline MOD:00038 , 1'-methyl-L-histidine MOD:00322 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6-methyl-L-lysine MOD:00085
EC [auth Br]SAC Parent Component: SER

RESIDAA0029 , AA0317 , AA0076 , AA0074 , AA0076