Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
K [auth I]SCOP2B Superfamily50S Ribosomal protein L14-like 8053077 3000433 SCOP2B (2022-06-29)
M [auth K]SCOP2B SuperfamilyWinged helix DNA-binding domain 8055714 3000034 SCOP2B (2022-06-29)
N [auth L]SCOP2B SuperfamilyNucleic acid-binding proteins 8052717 3000135 SCOP2B (2022-06-29)
N [auth L]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052715 3002138 SCOP2B (2022-06-29)
O [auth M]SCOP2B SuperfamilyL30e-like 8063978 3001739 SCOP2B (2022-06-29)
P [auth N]SCOP2B SuperfamilyHomeodomain-like 8052958 3000001 SCOP2B (2022-06-29)
P [auth N]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052959 3001284 SCOP2B (2022-06-29)
Q [auth O]SCOP2B SuperfamilyTranslational machinery components 8098844 3000571 SCOP2B (2022-06-29)
S [auth Q]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082685 3000100 SCOP2B (2022-06-29)
U [auth S]SCOP2B SuperfamilyS13-like H2TH domain 8101555 3000053 SCOP2B (2022-06-29)
V [auth T]SCOP2B SuperfamilyWinged helix DNA-binding domain 8089318 3000034 SCOP2B (2022-06-29)
W [auth U]SCOP2B SuperfamilyRibosomal protein S10 8098806 3001336 SCOP2B (2022-06-29)
X [auth V]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053139 3000068 SCOP2B (2022-06-29)
Y [auth W]SCOP2B SuperfamilyRibosomal protein S8 8095469 3000709 SCOP2B (2022-06-29)
BA [auth Z]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090992 3000034 SCOP2B (2022-06-29)
CA [auth a]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053143 3000068 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8052791 3001397 SCOP2B (2022-06-29)
EA [auth c]SCOP2B SuperfamilyNucleic acid-binding proteins 8063426 3000135 SCOP2B (2022-06-29)
FA [auth d]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052572 3000068 SCOP2B (2022-06-29)
GA [auth e]SCOP2B SuperfamilyRibosomal protein S30e-like 8053453 3002190 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyRibosomal S3Ae-like 8053212 3002166 SCOP2B (2022-06-29)
F [auth D]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8043545 3001043 SCOP2B (2022-06-29)
G [auth E]SCOP2B SuperfamilyNucleic acid-binding proteins 8052756 3000135 SCOP2B (2022-06-29)
G [auth E]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8052755 3001473 SCOP2B (2022-06-29)
G [auth E]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052757 3000334 SCOP2B (2022-06-29)
H [auth F]SCOP2B SuperfamilyRibosomal protein S7 8066003 3000799 SCOP2B (2022-06-29)
I [auth G]SCOP2B SuperfamilyGS N-terminal domain-like 8053171 3000408 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth H]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
J [auth H]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
K [auth I]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
L [auth J]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
L [auth J]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
L [auth J]PF11501Betacoronavirus replicase NSP1 (bCoV_NSP1)Betacoronavirus replicase NSP1- Family
M [auth K]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
N [auth L]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
N [auth L]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
O [auth M]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
P [auth N]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
Q [auth O]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
R [auth P]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
S [auth Q]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
U [auth S]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
V [auth T]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
W [auth U]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
X [auth V]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
Y [auth W]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
Z [auth X]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
AA [auth Y]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
C [auth A]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
C [auth A]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
D [auth B]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
E [auth C]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
E [auth C]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
E [auth C]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
F [auth D]PF07650KH domain (KH_2)KH domain- Domain
F [auth D]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
F [auth D]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
G [auth E]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
G [auth E]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
G [auth E]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
G [auth E]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
G [auth E]PF00467KOW motif (KOW)KOW motif- Family
H [auth F]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
H [auth F]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
I [auth G]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
I [auth G]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth p]Eukaryotic translation initiation factor 1
J [auth H]40S ribosomal protein S7
K [auth I]40S ribosomal protein S8
L [auth J]40S ribosomal protein S9
M [auth K]40S ribosomal protein S10
N [auth L]40S ribosomal protein S11
O [auth M]40S ribosomal protein S12
P [auth N]40S ribosomal protein S13
Q [auth O]40S ribosomal protein S14
R [auth P]40S ribosomal protein S15
S [auth Q]40S ribosomal protein S16
B [auth 2]18S rRNA---
T [auth R]40S ribosomal protein S17
U [auth S]Small ribosomal subunit protein uS13
V [auth T]Small ribosomal subunit protein eS19
W [auth U]40S ribosomal protein S20
X [auth V]40S ribosomal protein S21
Y [auth W]40S ribosomal protein S15a
Z [auth X]40S ribosomal protein S23
AA [auth Y]40S ribosomal protein S24
BA [auth Z]40S ribosomal protein S25
CA [auth a]40S ribosomal protein S26
C [auth A]40S ribosomal protein SA
DA [auth b]40S ribosomal protein S27
EA [auth c]40S ribosomal protein S28
FA [auth d]40S ribosomal protein S29
GA [auth e]Small ribosomal subunit protein eS30
HA [auth f]Ubiquitin-40S ribosomal protein S27a
IA [auth g]Receptor of activated protein C kinase 1
JA [auth h]60S ribosomal protein L41
KA [auth j]Nsp1
D [auth B]40S ribosomal protein S3a
E [auth C]40S ribosomal protein S2
F [auth D]40S ribosomal protein S3
G [auth E]40S ribosomal protein S4, X isoform
H [auth F]40S ribosomal protein S5
I [auth G]40S ribosomal protein S6

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth p]IPR005874Eukaryotic translation initiation factor SUI1Family
A [auth p]IPR001950SUI1 domainDomain
A [auth p]IPR036877SUI1 domain superfamilyHomologous Superfamily
J [auth H]IPR000554Small ribosomal subunit protein eS7Family
J [auth H]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
K [auth I]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
K [auth I]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
K [auth I]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
K [auth I]IPR001047Small ribosomal subunit protein eS8Family
L [auth J]IPR002942RNA-binding S4 domainDomain
L [auth J]IPR022801Small ribosomal subunit protein uS4Family
L [auth J]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
L [auth J]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
L [auth J]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
L [auth J]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
M [auth K]IPR037447Small ribosomal subunit protein eS10Family
M [auth K]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
M [auth K]IPR005326Plectin/eS10, N-terminalDomain
N [auth L]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
N [auth L]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
N [auth L]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
N [auth L]IPR000266Small ribosomal subunit protein uS17Family
N [auth L]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
O [auth M]IPR000530Small ribosomal subunit protein eS12Family
O [auth M]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
O [auth M]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
O [auth M]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
P [auth N]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
P [auth N]IPR000589Small ribosomal subunit protein uS15Family
P [auth N]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
P [auth N]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
Q [auth O]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
Q [auth O]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
Q [auth O]IPR001971Small ribosomal subunit protein uS11Family
R [auth P]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
R [auth P]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
R [auth P]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
R [auth P]IPR002222Small ribosomal subunit protein uS19Family
S [auth Q]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
S [auth Q]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
S [auth Q]IPR000754Small ribosomal subunit protein uS9Family
S [auth Q]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
T [auth R]IPR001210Small ribosomal subunit protein eS17Family
T [auth R]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
T [auth R]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
U [auth S]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
U [auth S]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
U [auth S]IPR001892Small ribosomal subunit protein uS13Family
U [auth S]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
V [auth T]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
V [auth T]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
V [auth T]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
V [auth T]IPR001266Small ribosomal subunit protein eS19Family
W [auth U]IPR027486Small ribosomal subunit protein uS10 domainDomain
W [auth U]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
W [auth U]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
W [auth U]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
W [auth U]IPR001848Small ribosomal subunit protein uS10Family
X [auth V]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
X [auth V]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
X [auth V]IPR001931Small ribosomal subunit protein eS21Family
Y [auth W]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
Y [auth W]IPR000630Small ribosomal subunit protein uS8Family
Y [auth W]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
Z [auth X]IPR006032Small ribosomal subunit protein uS12Family
Z [auth X]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Z [auth X]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
AA [auth Y]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
AA [auth Y]IPR001976Small ribosomal subunit protein eS24Family
AA [auth Y]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
AA [auth Y]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
BA [auth Z]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
BA [auth Z]IPR004977Small ribosomal subunit protein eS25Family
CA [auth a]IPR047864Ribosomal protein eS26, conserved siteConserved Site
CA [auth a]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
CA [auth a]IPR000892Small ribosomal subunit protein eS26Family
C [auth A]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
C [auth A]IPR001865Small ribosomal subunit protein uS2Family
C [auth A]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
C [auth A]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
C [auth A]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
C [auth A]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
C [auth A]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
DA [auth b]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
DA [auth b]IPR000592Small ribosomal subunit protein eS27Family
DA [auth b]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EA [auth c]IPR028626Ribosomal protein eS28 conserved siteConserved Site
EA [auth c]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
EA [auth c]IPR000289Small ribosomal subunit protein eS28Family
FA [auth d]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
FA [auth d]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
FA [auth d]IPR001209Small ribosomal subunit protein uS14Family
FA [auth d]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
GA [auth e]IPR019954Ubiquitin conserved siteConserved Site
GA [auth e]IPR000626Ubiquitin-like domainDomain
GA [auth e]IPR006846Small ribosomal subunit protein eS30Family
GA [auth e]IPR039415Ubiquitin-like protein FUBIDomain
GA [auth e]IPR019956Ubiquitin domainDomain
GA [auth e]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
HA [auth f]IPR019954Ubiquitin conserved siteConserved Site
HA [auth f]IPR050158Ubiquitin and ubiquitin-likeFamily
HA [auth f]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth f]IPR000626Ubiquitin-like domainDomain
HA [auth f]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
HA [auth f]IPR002906Small ribosomal subunit protein eS31Domain
HA [auth f]IPR019956Ubiquitin domainDomain
HA [auth f]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
IA [auth g]IPR019775WD40 repeat, conserved siteConserved Site
IA [auth g]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IA [auth g]IPR045223Small ribosomal subunit protein RACK1-likeFamily
IA [auth g]IPR020472G-protein beta WD-40 repeatRepeat
IA [auth g]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IA [auth g]IPR001680WD40 repeatRepeat
JA [auth h]IPR007836Large ribosomal subunit protein eS32Family
KA [auth j]IPR022733DPUP/SUD, C-terminal, betacoronavirusDomain
KA [auth j]IPR042515Non-structural protein NSP15, N-terminal domain superfamily, coronavirusHomologous Superfamily
KA [auth j]IPR043174Non-structural protein NSP15, middle domain superfamilyHomologous Superfamily
KA [auth j]IPR044315Nonstructural protein 14, betacoronavirusDomain
KA [auth j]IPR038123Non-structural protein NSP4, C-terminal superfamily, coronavirusHomologous Superfamily
KA [auth j]IPR042570Non-structural protein NSP3, nucleic acid-binding domain superfamily, betacoronavirusHomologous Superfamily
KA [auth j]IPR043178Papain-like protease, thumb domain superfamily, coronavirusHomologous Superfamily
KA [auth j]IPR046441RNA-dependent RNA polymerase, coronavirusDomain
KA [auth j]IPR044863Nidovirus RdRp-associated nucleotidyl transferase (NiRAN) domainDomain
KA [auth j]IPR044343Nonstructural protein 13, 1B domain, coronavirusDomain
KA [auth j]IPR037227Endoribonuclease EndoU-likeHomologous Superfamily
KA [auth j]IPR027352Nonstructural protein 13, zinc-binding domain, coronavirus-likeDomain
KA [auth j]IPR009003Peptidase S1, PA clanHomologous Superfamily
KA [auth j]IPR013016Peptidase C16, coronavirusDomain
KA [auth j]IPR009466Non-structural protein 14, coronavirusDomain
KA [auth j]IPR044357NSP3, first ubiquitin-like (Ubl) domain, coronavirusDomain
KA [auth j]IPR046436Nidovirus 3'-5' exoribonuclease domainDomain
KA [auth j]IPR047570NSP12, interface domain, coronavirusDomain
KA [auth j]IPR018995RNA synthesis protein NSP10, coronavirusDomain
KA [auth j]IPR043615Nonstructural protein 2, N-terminal domain, coronavirusDomain
KA [auth j]IPR050534Coronaviruses polyprotein 1abFamily
KA [auth j]IPR043177Papain-like protease, N-terminal domain superfamily, coronavirusHomologous Superfamily
KA [auth j]IPR043606Coronavirus replicase NSP15, N-terminal oligomerizationDomain
KA [auth j]IPR044330Nonstructural protein 15, N-terminal domain, alpha/beta-coronavirusDomain
KA [auth j]IPR041679DNA2/NAM7 helicase-like, C-terminalDomain
KA [auth j]IPR024375Non-structural protein NSP3, SUD-M domain, betacoronavirusDomain
KA [auth j]IPR014828Non-structural protein NSP7, coronavirusDomain
KA [auth j]IPR043503Papain-like viral protease, palm and finger domains, coronavirusHomologous Superfamily
KA [auth j]IPR014829Non-structural protein NSP8, coronavirusDomain
KA [auth j]IPR036499Non-structural protein NSP9 superfamily, coronavirusHomologous Superfamily
KA [auth j]IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
KA [auth j]IPR044389Non-structural protein 2, SARS-CoV-likeDomain
KA [auth j]IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
KA [auth j]IPR008740Peptidase C30, coronavirusDomain
KA [auth j]IPR036333RNA synthesis protein NSP10 superfamily, coronavirusHomologous Superfamily
KA [auth j]IPR049894Coronavirus NSP3, 3Ecto domainDomain
KA [auth j]IPR043472Macro domain-likeHomologous Superfamily
KA [auth j]IPR043609NendoU domain, nidovirusDomain
KA [auth j]IPR032592Non-structural protein NSP3, nucleic acid-binding domain, betacoronavirusDomain
KA [auth j]IPR043613Non-structural protein 2, C-terminal domain, coronavirusDomain
KA [auth j]IPR038083Non-structural protein NSP3A domain-like superfamilyHomologous Superfamily
KA [auth j]IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
KA [auth j]IPR048673Nonstructural protein 13, stalk domain, coronavirusDomain
KA [auth j]IPR046435NSP14, guanine-N7-methyltransferase domain, coronavirusDomain
KA [auth j]IPR009469RNA-dependent RNA polymerase, N-terminal, coronavirusDomain
KA [auth j]IPR043611Coronavirus replicase NSP3, C-terminalDomain
KA [auth j]IPR044864Non-structural protein NSP3, SUD-N (Mac2) domain, betacoronavirusDomain
KA [auth j]IPR047566Coronavirus replicase NSP3, Y domainDomain
KA [auth j]IPR048672Nonstructural protein 13, zinc-binding domain, coronavirusDomain
KA [auth j]IPR043612Non-structural protein NSP4, N-terminal, coronavirusDomain
KA [auth j]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
KA [auth j]IPR043608Nonstructural protein 15, middle domain, coronavirusDomain
KA [auth j]IPR044353NSP3, second ubiquitin-like (Ubl) domain, coronavirusDomain
KA [auth j]IPR037204Non-structural protein NSP7 superfamily, coronavirusHomologous Superfamily
KA [auth j]IPR043610Non-structural protein 6, coronavirusDomain
KA [auth j]IPR027351(+) RNA virus helicase core domainDomain
KA [auth j]IPR044322Nonstructural protein 15, middle domain, alpha/betacoronavirusDomain
KA [auth j]IPR009461Non-structural protein NSP16, coronavirus-likeDomain
KA [auth j]IPR043477Peptidase C30, domain 3, coronavirusHomologous Superfamily
KA [auth j]IPR038400Non-structural protein NSP3, SUD-M domain superfamily, betacoronavirusHomologous Superfamily
KA [auth j]IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
KA [auth j]IPR044401NSP15, NendoU domain, coronavirusDomain
KA [auth j]IPR014822Non-structural protein NSP9, coronavirusDomain
KA [auth j]IPR038030NSP1 globular domain superfamily, betacoronavirusHomologous Superfamily
KA [auth j]IPR021590NSP1, globular domain, betacoronavirusDomain
KA [auth j]IPR044367Non-structural protein 6, betacoronavirusDomain
KA [auth j]IPR037230Non-structural protein NSP8 superfamily, coronavirusHomologous Superfamily
KA [auth j]IPR046440Arterivirus Nsp11 N-terminal/Coronavirus NSP15 middle domainDomain
KA [auth j]IPR032505Non-structural protein NSP4, C-terminal, coronavirusDomain
KA [auth j]IPR046438Nidovirus 2-O-methyltransferaseDomain
KA [auth j]IPR002589Macro domainDomain
KA [auth j]IPR047567Non-structural protein NSP3, group 2-specific marker domain, betacoronavirusDomain
KA [auth j]IPR044371Non-structural protein 3, X-domain-likeDomain
KA [auth j]IPR007094RNA-directed RNA polymerase, catalytic domainDomain
D [auth B]IPR001593Small ribosomal subunit protein eS1Family
D [auth B]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
D [auth B]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
E [auth C]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth C]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
E [auth C]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
E [auth C]IPR000851Small ribosomal subunit protein uS5Family
E [auth C]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
E [auth C]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth C]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
F [auth D]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
F [auth D]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
F [auth D]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
F [auth D]IPR004044K Homology domain, type 2Domain
F [auth D]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
F [auth D]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
F [auth D]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
G [auth E]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
G [auth E]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
G [auth E]IPR013845Small ribosomal subunit protein eS4, central regionDomain
G [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
G [auth E]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
G [auth E]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
G [auth E]IPR002942RNA-binding S4 domainDomain
G [auth E]IPR000876Small ribosomal subunit protein eS4Family
G [auth E]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
G [auth E]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
G [auth E]IPR005824KOWDomain
H [auth F]IPR023798Small ribosomal subunit protein uS7 domainDomain
H [auth F]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
H [auth F]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
H [auth F]IPR000235Small ribosomal subunit protein uS7Family
H [auth F]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
I [auth G]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
I [auth G]IPR001377Small ribosomal subunit protein eS6Family
I [auth G]IPR014401Small ribosomal subunit protein eS6-likeFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth p]PharosP41567
J [auth H]PharosP62081
K [auth I]PharosP62241
L [auth J]PharosP46781
M [auth K]PharosP46783
N [auth L]PharosP62280
O [auth M]PharosP25398
P [auth N]PharosP62277
Q [auth O]PharosP62263
R [auth P]PharosP62841
S [auth Q]PharosP62249
T [auth R]PharosP08708
U [auth S]PharosP62269
V [auth T]PharosP39019
W [auth U]PharosP60866
X [auth V]PharosP63220
Y [auth W]PharosP62244
Z [auth X]PharosP62266
AA [auth Y]PharosP62847
BA [auth Z]PharosP62851
CA [auth a]PharosP62854
C [auth A]PharosP08865
DA [auth b]PharosP42677
EA [auth c]PharosP62857
FA [auth d]PharosP62273
GA [auth e]PharosP62861
HA [auth f]PharosP62979
IA [auth g]PharosP63244
JA [auth h]PharosP62945
E [auth C]PharosP15880
F [auth D]PharosP23396
G [auth E]PharosP62701
H [auth F]PharosP46782
I [auth G]PharosP62753

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
Q [auth O]IAS
B [auth 2]4AC
B [auth 2]6MZ Parent Component: A

B [auth 2]A2M Parent Component: A

B [auth 2]B8N
B [auth 2]G7M Parent Component: G

B [auth 2]MA6 Parent Component: A

B [auth 2]OMC Parent Component: C

B [auth 2]OMG Parent Component: G

B [auth 2]OMU Parent Component: U

B [auth 2]PSU Parent Component: U

U [auth S]SAC Parent Component: SER

V [auth T]NMM Parent Component: ARG

X [auth V]AME Parent Component: MET

Z [auth X]HY3 Parent Component: PRO

RESIDAA0029

PSI-MOD :  3-hydroxy-L-proline MOD:00038
C [auth A]SAC Parent Component: SER

RESIDAA0029