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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Xu, W."

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Search Summary

This query matches 35 Structures.

Refinements

Structure Determination Methodology

experimental (35)

Scientific Name of Source Organism

	Arabidopsis thaliana (13)
	Nicotiana benthamiana (5)
	Phytophthora sojae (3)
	Solanum lycopersicum (3)
	Arabidopsis (2)
	Blumeria graminis f. sp. tritici (2)
	Blumeria hordei (2)
	Hyaloperonospora arabidopsidis Emoy2 (2)
	Oryza sativa Japonica Group (2)
	Rattus norvegicus (2)

More...

Taxonomy

	Eukaryota (35)
	Bacteria (1)

Experimental Method

	ELECTRON MICROSCOPY (20)
	X-RAY DIFFRACTION (15)

Polymer Entity Type

Protein (35)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (3)
	2.0 - 2.5 (2)
	2.5 - 3.0 (9)
	3.0 - 3.5 (12)
	3.5 - 4.0 (6)
	4.0 - 4.5 (1)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (1)
	2015 - 2019 (10)
	2020 - 2024 (22)

Enzyme Classification Name

	Transferases (11)
	Hydrolases (9)

Symmetry Type

	Asymmetric (26)
	Cyclic (8)
	Dihedral (1)

SCOP Classification

	Small proteins (1)
	All alpha proteins (1)
	All beta proteins (1)
	Alpha and beta proteins (a+b) (1)

AllSelected

1 to 25 of 35 Structures

Page 1 of 2

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1GGP \| pdb_00001ggp	Download File View File

CRYSTAL STRUCTURE OF TRICHOSANTHES KIRILOWII LECTIN-1 AND ITS RELATION TO THE TYPE 2 RIBOSOME INACTIVATING PROTEINS

Li, M., Chai, J.J., Wang, Y.P., Wang, K.Y., Bi, R.C.

(2003) Protein Pept Lett 8: 81-87

Released	2003-03-18
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Trichosanthes kirilowii
Macromolecule	PROTEIN (LECTIN 1 A CHAIN) (protein) PROTEIN (LECTIN 1 B CHAIN) (protein)

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1JL9 \| pdb_00001jl9	Download File View File

Crystal Structure of Human Epidermal Growth Factor

Lu, H.S., Chai, J.J., Li, M., Huang, B.R., He, C.H., Bi, R.C.

(2001) J Biological Chem 276: 34913-34917

Released	2001-10-24
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	EPIDERMAL GROWTH FACTOR (protein)

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2QKW \| pdb_00002qkw	Download File View File

Structural basis for activation of plant immunity by bacterial effector protein AvrPto

Xing, W.M., Zou, Y., Liu, Q., Hao, Q., Zhou, J.M., Chai, J.J.

(2007) Nature 449: 243-247

Released	2007-08-21
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Pseudomonas syringae Solanum pimpinellifolium
Macromolecule	Avirulence protein (protein) Protein kinase (protein)

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5GQR \| pdb_00005gqr	Download File View File

Crystal structure of PXY-CLE41-SERK2

Chai, J.J., Zhang, H.Q.

(2016) Mol Plant 9: 1406-1414

Released	2016-12-14
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Arabideae Arabidopsis thaliana
Macromolecule	Leucine-rich repeat receptor-like protein kinase TDR (protein) Somatic embryogenesis receptor kinase 2 (protein) TDIF (protein)
Unique Ligands	NAG

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5GR8 \| pdb_00005gr8	Download File View File

Crystal structure of PEPR1-AtPEP1

Chai, J.J., Tang, J.

(2015) Cell Res 25: 110-120

Released	2016-12-14
Method	X-RAY DIFFRACTION 2.587 Å
Organisms	Arabidopsis thaliana
Macromolecule	Elicitor peptide 1 (protein) Leucine-rich repeat receptor-like protein kinase PEPR1 (protein)
Unique Ligands	NAG, SO4
Unique branched monosaccharides	NAG

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5GR9 \| pdb_00005gr9	Download File View File

Crystal structure of PXY-TDIF/CLE41

Chai, J.J., Zhang, H.Q.

(2016) Cell Res 26: 543-555

Released	2016-11-23
Method	X-RAY DIFFRACTION 2.767 Å
Organisms	Arabidopsis Arabidopsis thaliana
Macromolecule	Leucine-rich repeat receptor-like protein kinase TDR (protein) TDIF/CLE41 (protein)
Unique Ligands	NAG

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5JCD \| pdb_00005jcd	Download File View File

Crystal structure of OsCEBiP

Chai, J.J., Liu, S.M., Wang, J.Z.

(2016) Structure 24: 1192-1200

Released	2017-02-22
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Oryza sativa Japonica Group
Macromolecule	Chitin elicitor-binding protein (protein)
Unique Ligands	NAG

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5JCE \| pdb_00005jce	Download File View File

Crystal structure of OsCEBiP complex

Chai, J.J., Liu, S.M., Wang, J.Z.

(2016) Structure 24: 1192-1200

Released	2016-06-08
Method	X-RAY DIFFRACTION 2.51 Å
Organisms	Oryza sativa Japonica Group
Macromolecule	Chitin elicitor-binding protein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG

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6J5T \| pdb_00006j5t	Download File View File

Reconstitution and structure of a plant NLR resistosome conferring immunity

Wang, J.Z., Wang, J., Hu, M.J., Wang, H.W., Zhou, J.M., Chai, J.J.

(2019) Science 364:

Released	2019-03-20
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Arabidopsis thaliana
Macromolecule	Disease resistance RPP13-like protein 4 (protein) Probable serine/threonine-protein kinase PBL2 (protein) Protein kinase superfamily protein (protein)
Unique Ligands	DTP, U5P

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6J5U \| pdb_00006j5u	Download File View File

Ligand-triggered allosteric ADP release primes a plant NLR complex

Wang, J.Z., Wang, J., Meijuan, H., Wang, H.W., Zhou, J.M., Chai, J.J.

(2019) Science 364:

Released	2019-04-03
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Arabidopsis thaliana
Macromolecule	Disease resistance RPP13-like protein 4 (protein) Probable serine/threonine-protein kinase PBL2 (protein) Protein kinase superfamily protein (protein)
Unique Ligands	U5P

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6J5V \| pdb_00006j5v	Download File View File

Ligand-triggered allosteric ADP release primes a plant NLR complex

Wang, J.Z., Wang, J., Hu, M.J., Wang, H.W., Zhou, J.M., Chai, J.J.

(2019) Science 364:

Released	2019-04-03
Method	ELECTRON MICROSCOPY 4.25 Å
Organisms	Arabidopsis thaliana
Macromolecule	Disease resistance RPP13-like protein 4 (protein) Probable serine/threonine-protein kinase PBL2 (protein) Protein kinase superfamily protein (protein)
Unique Ligands	U5P

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6J5W \| pdb_00006j5w	Download File View File

Ligand-triggered allosteric ADP release primes a plant NLR complex

Wang, J.Z., Wang, J., Hu, M.J., Wang, H.W., Zhou, J.M., Chai, J.J.

(2019) Science 364:

Released	2019-04-03
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Arabidopsis thaliana
Macromolecule	Disease resistance RPP13-like protein 4 (protein) RKS1 (protein)
Unique Ligands	ADP

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6J6I \| pdb_00006j6i	Download File View File

Reconstitution and structure of a plant NLR resistosome conferring immunity

Wang, J.Z., Wang, J., Hu, M.J., Wang, H.W., Zhou, J.M., Chai, J.J.

(2019) Science 364:

Released	2019-03-20
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Arabidopsis thaliana
Macromolecule	Disease resistance RPP13-like protein 4 (protein) Probable serine/threonine-protein kinase PBL2 (protein) Protein kinase superfamily protein (protein)
Unique Ligands	DTP, U5P

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7CRB \| pdb_00007crb	Download File View File

Cryo-EM structure of plant NLR RPP1 LRR-ID domain in complex with ATR1

Ma, S.C., Lapin, D., Liu, L., Sun, Y., Song, W., Zhang, X.X., Logemann, E., Yu, D.L., Wang, J., Jirschitzka, J., Han, Z.F., SchulzeLefert, P., Parker, J.E., Chai, J.J.

(2020) Science 370:

Released	2020-12-16
Method	ELECTRON MICROSCOPY 3.16 Å
Organisms	Arabidopsis thaliana Hyaloperonospora arabidopsidis Emoy2
Macromolecule	Avirulence protein ATR1 (protein) NAD+ hydrolase (NADase) (protein)

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7CRC \| pdb_00007crc	Download File View File

Cryo-EM structure of plant NLR RPP1 tetramer in complex with ATR1

Ma, S.C., Lapin, D., Liu, L., Sun, Y., Song, W., Zhang, X.X., Logemann, E., Yu, D.L., Wang, J., Jirschitzka, J., Han, Z.F., SchulzeLefert, P., Parker, J.E., Chai, J.J.

(2020) Science 370:

Released	2020-12-16
Method	ELECTRON MICROSCOPY 3.02 Å
Organisms	Arabidopsis thaliana Hyaloperonospora arabidopsidis Emoy2
Macromolecule	Avirulence protein ATR1 (protein) NAD+ hydrolase (NADase) (protein)
Unique Ligands	ADP, ATP

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7CRV \| pdb_00007crv	Download File View File

Crystal structure of rNLRP1-FIIND

Huang, M.H., Zhang, X.X., Wang, J., Chai, J.J.

(2021) Nature 592: 773-777

Released	2021-03-24
Method	X-RAY DIFFRACTION 2 Å
Organisms	Rattus norvegicus
Macromolecule	NLR family protein 1 (protein)

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7CRW \| pdb_00007crw	Download File View File

Cryo-EM structure of rNLRP1-rDPP9 complex

Huang, M.H., Zhang, X.X., Wang, J., Chai, J.J.

(2021) Nature 592: 773-777

Released	2021-03-24
Method	ELECTRON MICROSCOPY 3.18 Å
Organisms	Rattus norvegicus
Macromolecule	Dipeptidyl peptidase 9 (protein) NLR family protein 1 (protein)

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7DFV \| pdb_00007dfv	Download File View File

Cryo-EM structure of plant NLR RPP1 tetramer core part

Ma, S.C., Lapin, D., Liu, L., Sun, Y., Song, W., Zhang, X.X., Logemann, E., Yu, D.L., Wang, J., Jirschitzka, J., Han, Z.F., SchulzeLefert, P., Parker, J.E., Chai, J.J.

(2020) Science 370:

Released	2020-12-16
Method	ELECTRON MICROSCOPY 2.99 Å
Organisms	Arabidopsis thaliana
Macromolecule	NAD+ hydrolase (NADase) (protein)

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7DRB \| pdb_00007drb	Download File View File

Crystal structure of plant receptor like protein RXEG1 with xyloglucanase XEG1

Sun, Y., Wang, Y., Zhang, X.X., Chen, Z.D., Xia, Y.Q., Sun, Y.J., Zhang, M.M., Xiao, Y., Han, Z.F., Wang, Y.C., Chai, J.J.

(2022) Nature 610: 335-342

Released	2022-06-22
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Nicotiana benthamiana Phytophthora sojae
Macromolecule	Cell 12A endoglucanase (protein) Membrane-localized LRR receptor-like protein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7DRC \| pdb_00007drc	Download File View File

Cryo-EM structure of plant receptor like protein RXEG1 in complex with xyloglucanase XEG1 and BAK1

Sun, Y., Wang, Y., Zhang, X.X., Chen, Z.D., Xia, Y.Q., Sun, Y.J., Zhang, M.M., Xiao, Y., Han, Z.F., Wang, Y.C., Chai, J.J.

(2022) Nature 610: 335-342

Released	2022-06-22
Method	ELECTRON MICROSCOPY 2.92 Å
Organisms	Nicotiana benthamiana Phytophthora sojae
Macromolecule	Brassinosteroid insensitive 1-associated receptor kinase 1 (protein) Cell 12A endoglucanase (protein) Membrane-localized LRR receptor-like protein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7W3T \| pdb_00007w3t	Download File View File

Cryo-EM structure of plant receptor like kinase NbBAK1 in RXEG1-BAK1-XEG1 complex

Sun, Y., Wang, Y., Zhang, X.X., Chen, Z.D., Xia, Y.Q., Sun, Y.J., Zhang, M.M., Xiao, Y., Han, Z.F., Wang, Y.C., Chai, J.J.

(2022) Nature 610: 335-342

Released	2022-06-22
Method	ELECTRON MICROSCOPY 3.59 Å
Organisms	Nicotiana benthamiana
Macromolecule	Brassinosteroid insensitive 1-associated receptor kinase 1 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, NAG

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7W3V \| pdb_00007w3v	Download File View File

Plant receptor like protein RXEG1 in complex with xyloglucanase XEG1

Sun, Y., Wang, Y., Zhang, X.X., Chen, Z.D., Xia, Y.Q., Sun, Y.J., Zhang, M.M., Xiao, Y., Han, Z.F., Wang, Y.C., Chai, J.J.

(2022) Nature 610: 335-342

Released	2022-06-22
Method	ELECTRON MICROSCOPY 3.11 Å
Organisms	Nicotiana benthamiana Phytophthora sojae
Macromolecule	Cell 12A endoglucanase (protein) Membrane-localized LRR receptor-like protein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7W3X \| pdb_00007w3x	Download File View File

Cryo-EM structure of plant receptor like protein RXEG1

Sun, Y., Wang, Y., Zhang, X.X., Chen, Z.D., Xia, Y.Q., Sun, Y.J., Zhang, M.M., Xiao, Y., Han, Z.F., Wang, Y.C., Chai, J.J.

(2022) Nature 610: 335-342

Released	2022-06-22
Method	ELECTRON MICROSCOPY 3.21 Å
Organisms	Nicotiana benthamiana
Macromolecule	Membrane-localized LRR receptor-like protein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	BMA, MAN, NAG

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7XC2 \| pdb_00007xc2	Download File View File

Cryo EM structure of oligomeric complex formed by wheat CNL Sr35 and the effector AvrSr35 of the wheat stem rust pathogen

Alexander, F., Li, E.T., Aaron, L., Deng, Y.N., Sun, Y., Chai, J.J.

(2022) Nature 610: 532-539

Released	2022-09-21
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Puccinia graminis f. sp. tritici Triticum monococcum
Macromolecule	Avirulence factor (protein) CNL9 (protein)
Unique Ligands	ATP