7O7Z

Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
L [auth AZ]Ribosomal_S2_2e7o7zAZ1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
M [auth Aa]Ribosomal_S3Ae_Ne7o7zAa2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
M [auth Aa]Ribosomal_S3Ae_Ce7o7zAa1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
N [auth Ab]Ribosomal_S5_C_1e7o7zAb1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
N [auth Ab]Ribosomal_S5_3e7o7zAb3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
N [auth Ab]Ribosomal_S5_2e7o7zAb2 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
O [auth Ac]Ribosomal_S3_Ce7o7zAc1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
O [auth Ac]KH_2_3e7o7zAc2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
P [auth Ad]Ribosomal_S4ee7o7zAd1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
P [auth Ad]40S_S4_Ce7o7zAd3 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
P [auth Ad]RS4NTe7o7zAd2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
Q [auth Ae]Ribosomal_S7_1e7o7zAe1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
R [auth Af]Ribosomal_S6ee7o7zAf1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
S [auth Ag]Ribosomal_S7e_Ne7o7zAg2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
S [auth Ag]Ribosomal_S7e_C_1e7o7zAg1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_1ECOD (1.6)
B [auth AA]Ribosomal_S27ee7o7zAA1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
T [auth Ah]Ribosomal_S8ee7o7zAh1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
U [auth Ai]S4e7o7zAi1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
V [auth Aj]S10_plectine7o7zAj1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
W [auth Ak]Ribosomal_S17_1e7o7zAk1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
X [auth Al]Ribosomal_L7Aee7o7zAl1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
Y [auth Am]Ribosomal_S13_Ne7o7zAm1 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
Y [auth Am]Ribosomal_S15_2e7o7zAm2 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
Z [auth An]Ribosomal_S11e7o7zAn1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
AA [auth Ao]Ribosomal_S19e7o7zAo1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
BA [auth Ap]Ribosomal_S9e7o7zAp1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
CA [auth Aq]Ribosomal_S17ee7o7zAq1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
C [auth AB]Ribosomal_S28ee7o7zAB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
DA [auth Ar]Ribosomal_S13e7o7zAr1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
EA [auth As]Ribosomal_S19ee7o7zAs1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
FA [auth At]Ribosomal_S10_1e7o7zAt1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
GA [auth Au]Ribosomal_S21ee7o7zAu1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
HA [auth Av]Ribosomal_S8_N_1e7o7zAv2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
HA [auth Av]Ribosomal_S8_C_1e7o7zAv1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
IA [auth Aw]Ribosom_S12_S23e7o7zAw1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
JA [auth Ax]Ribosomal_S24ee7o7zAx1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
KA [auth Ay]Ribosomal_S25e7o7zAy1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
LA [auth Az]Ribosomal_L41e7o7zAz1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
D [auth AC]Ribosomal_S27e7o7zAC1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
PA [auth BA]Ribosomal_L2_1e7o7zBA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
PA [auth BA]Ribosomal_L2_C_2e7o7zBA2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
QA [auth BB]Ribosomal_L3e7o7zBB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
RA [auth BC]Ribosomal_L4e7o7zBC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
RA [auth BC]Ribos_L4_asso_Ce7o7zBC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
SA [auth BD]Ribosomal_L5ee7o7zBD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
TA [auth BE]Ribosomal_L6ee7o7zBE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
UA [auth BF]Ribosomal_L30_1e7o7zBF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
VA [auth BG]Ribosomal_L7Ae_1e7o7zBG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
WA [auth BH]Ribosomal_L6_2e7o7zBH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
WA [auth BH]Ribosomal_L6e7o7zBH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
E [auth AD]Ribosomal_S30e7o7zAD1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
XA [auth BI]Ribosomal_L16e7o7zBI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
YA [auth BJ]Ribosomal_L5_Ce7o7zBJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
AB [auth BL]Ribosomal_L13ee7o7zBL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
BB [auth BM]Ribosomal_L14ee7o7zBM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
CB [auth BN]Ribosomal_L15ee7o7zBN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
DB [auth BO]Ribosomal_L13e7o7zBO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
EB [auth BP]Ribosomal_L22e7o7zBP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
FB [auth BQ]Ribosomal_L18e7o7zBQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
GB [auth BR]Ribosomal_L19e_Ne7o7zBR1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
GB [auth BR]Ribosomal_L19e_Ce7o7zBR2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
F [auth AE]Ribosomal_S26ee7o7zAE1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
HB [auth BS]Ribosomal_L18Ae7o7zBS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
IB [auth BT]Ribosomal_L21ee7o7zBT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
JB [auth BU]Ribosomal_L22ee7o7zBU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
KB [auth BV]Ribosomal_L14e7o7zBV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
LB [auth BW]Ribosomal_L24ee7o7zBW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
MB [auth BX]Ribosomal_L23_3e7o7zBX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
NB [auth BY]Ribosomal_L26e7o7zBY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
OB [auth BZ]Ribosomal_L27ee7o7zBZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
PB [auth Ba]Ribosomal_L18e7o7zBa1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
QB [auth Bb]Ribosomal_L29ee7o7zBb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
G [auth AF]DUF1899e7o7zAF1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: DUF1899ECOD (1.6)
RB [auth Bc]Ribosomal_L7Aee7o7zBc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
SB [auth Bd]Ribosomal_L31ee7o7zBd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
TB [auth Be]Ribosomal_L32ee7o7zBe1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
UB [auth Bf]Ribosomal_L35Aee7o7zBf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
VB [auth Bg]Ribosomal_L34ee7o7zBg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
WB [auth Bh]Ribosomal_L29_2e7o7zBh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
XB [auth Bi]Ribosomal_L36ee7o7zBi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
YB [auth Bj]Ribosomal_L37ee7o7zBj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
ZB [auth Bk]Ribosomal_L38ee7o7zBk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
AC [auth Bl]Ribosomal_L39e7o7zBl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
H [auth AG]Ribosomal_S14_2e7o7zAG1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
BC [auth Bm]Ribosomal_L40ee7o7zBm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
CC [auth Bo]Ribosomal_L44e7o7zBo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
DC [auth Bp]Ribosomal_L37aee7o7zBp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
EC [auth Br]Ribosomal_L28ee7o7zBr1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: Ribosomal_L28eECOD (1.6)
FC [auth Bs]Ribosomal_L10e7o7zBs1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
FC [auth Bs]Ribosomal_P0_L10ee7o7zBs2 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: Ribosomal_P0_L10eECOD (1.6)
GC [auth Bt]Ribosomal_L11e7o7zBt2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
GC [auth Bt]Ribosomal_L11_Ne7o7zBt1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
HC [auth Bv]Ribosomal_L1_2nd_1e7o7zBv2 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
HC [auth Bv]Ribosomal_L1_1st_1e7o7zBv1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1st_1ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth A2]18S rRNA---
J [auth AI]E-site tRNA---
K [auth AT]P-site Phe-tRNA(Phe)---
L [auth AZ]40S ribosomal protein SA
M [auth Aa]40S ribosomal protein S3a
N [auth Ab]Ribosomal protein uS5---
O [auth Ac]40S ribosomal protein S3
P [auth Ad]Ribosomal protein eS4---
Q [auth Ae]Ribosomal protein S5
R [auth Af]40S ribosomal protein S6
S [auth Ag]40S ribosomal protein S7
B [auth AA]40S ribosomal protein S27
T [auth Ah]40S ribosomal protein S8
U [auth Ai]Ribosomal protein S9 (Predicted)
V [auth Aj]eS10 -
W [auth Ak]40S ribosomal protein S11
X [auth Al]40S ribosomal protein S12
Y [auth Am]uS15
Z [auth An]40S ribosomal protein uS11
AA [auth Ao]40S ribosomal protein uS19
BA [auth Ap]uS9
CA [auth Aq]40S ribosomal protein eS17
C [auth AB]Ribosomal protein S28
DA [auth Ar]40S ribosomal protein S18
EA [auth As]Ribosomal protein eS19---
FA [auth At]40S ribosomal protein uS10
GA [auth Au]Ribosomal protein eS21---
HA [auth Av]Ribosomal protein S15a
IA [auth Aw]40S ribosomal protein S23
JA [auth Ax]40S ribosomal protein S24
KA [auth Ay]40S ribosomal protein S25
LA [auth Az]60s ribosomal protein l41
MA [auth B5]28S rRNA---
D [auth AC]Ribosomal protein S27a
NA [auth B7]5S---
OA [auth B8]5.8S rRNA---
PA [auth BA]Ribosomal protein uL2---
QA [auth BB]Ribosomal protein L3
RA [auth BC]60S ribosomal protein L4
SA [auth BD]Ribosomal_L18_c domain-containing protein---
TA [auth BE]60S ribosomal protein L6
UA [auth BF]Ribosomal Protein uL30---
VA [auth BG]Ribosomal protein eL8---
WA [auth BH]60S ribosomal protein L9
E [auth AD]40S ribosomal protein S30
XA [auth BI]60S ribosomal protein L10
YA [auth BJ]Ribosomal protein L11
ZA [auth BK]Replicase polyprotein 1ab
AB [auth BL]Ribosomal protein eL13---
BB [auth BM]Ribosomal protein L14
CB [auth BN]Ribosomal protein L15
DB [auth BO]Ribosomal protein uL13---
EB [auth BP]uL22---
FB [auth BQ]Ribosomal Protein eL18---
GB [auth BR]60S ribosomal protein L19
F [auth AE]Ribosomal protein eS26---
HB [auth BS]Ribosomal protein eL20---
IB [auth BT]eL21
JB [auth BU]Ribosomal protein eL22---
KB [auth BV]Ribosomal protein L23
LB [auth BW]eL24
MB [auth BX]uL23
NB [auth BY]Ribosomal protein L26
OB [auth BZ]60S ribosomal protein L27
PB [auth Ba]60S ribosomal protein L27a
QB [auth Bb]60S ribosomal protein L29
G [auth AF]RACK1
RB [auth Bc]eL30
SB [auth Bd]eL31
TB [auth Be]eL32---
UB [auth Bf]eL33
VB [auth Bg]60S ribosomal protein L34
WB [auth Bh]uL29
XB [auth Bi]60S ribosomal protein L36
YB [auth Bj]Ribosomal protein L37
ZB [auth Bk]eL38
AC [auth Bl]eL39
H [auth AG]uS14
BC [auth Bm]60S ribosomal protein L40---
CC [auth Bo]eL42---
DC [auth Bp]eL43
EC [auth Br]Ribosomal protein eL28---
FC [auth Bs]60S acidic ribosomal protein P0
GC [auth Bt]Ribosomal protein L12
HC [auth Bv]Ribosomal protein uL1
I [auth AH]mRNA containing SARS-CoV-2 sequence---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
L [auth AZ]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
L [auth AZ]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
L [auth AZ]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
L [auth AZ]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
L [auth AZ]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
L [auth AZ]IPR001865Small ribosomal subunit protein uS2Family
L [auth AZ]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
M [auth Aa]IPR001593Small ribosomal subunit protein eS1Family
M [auth Aa]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
M [auth Aa]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
O [auth Ac]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
O [auth Ac]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
O [auth Ac]IPR004044K Homology domain, type 2Domain
O [auth Ac]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
O [auth Ac]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
O [auth Ac]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
O [auth Ac]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
Q [auth Ae]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
Q [auth Ae]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
Q [auth Ae]IPR000235Small ribosomal subunit protein uS7Family
Q [auth Ae]IPR023798Small ribosomal subunit protein uS7 domainDomain
Q [auth Ae]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
R [auth Af]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
R [auth Af]IPR001377Small ribosomal subunit protein eS6Family
R [auth Af]IPR014401Small ribosomal subunit protein eS6-likeFamily
S [auth Ag]IPR000554Small ribosomal subunit protein eS7Family
S [auth Ag]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
B [auth AA]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
B [auth AA]IPR000592Small ribosomal subunit protein eS27Family
B [auth AA]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
T [auth Ah]IPR001047Small ribosomal subunit protein eS8Family
T [auth Ah]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
T [auth Ah]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
T [auth Ah]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
U [auth Ai]IPR002942RNA-binding S4 domainDomain
U [auth Ai]IPR022801Small ribosomal subunit protein uS4Family
U [auth Ai]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
U [auth Ai]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
U [auth Ai]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
U [auth Ai]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
V [auth Aj]IPR037447Small ribosomal subunit protein eS10Family
V [auth Aj]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
V [auth Aj]IPR005326Plectin/eS10, N-terminalDomain
W [auth Ak]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
W [auth Ak]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
W [auth Ak]IPR000266Small ribosomal subunit protein uS17Family
W [auth Ak]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
W [auth Ak]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
X [auth Al]IPR000530Small ribosomal subunit protein eS12Family
X [auth Al]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
X [auth Al]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
X [auth Al]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
Y [auth Am]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
Y [auth Am]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
Y [auth Am]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
Y [auth Am]IPR000589Small ribosomal subunit protein uS15Family
Z [auth An]IPR001971Small ribosomal subunit protein uS11Family
Z [auth An]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
Z [auth An]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
AA [auth Ao]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
AA [auth Ao]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
AA [auth Ao]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
AA [auth Ao]IPR002222Small ribosomal subunit protein uS19Family
BA [auth Ap]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
BA [auth Ap]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
BA [auth Ap]IPR000754Small ribosomal subunit protein uS9Family
BA [auth Ap]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
CA [auth Aq]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
CA [auth Aq]IPR001210Small ribosomal subunit protein eS17Family
CA [auth Aq]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
C [auth AB]IPR028626Ribosomal protein eS28 conserved siteConserved Site
C [auth AB]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth AB]IPR000289Small ribosomal subunit protein eS28Family
DA [auth Ar]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
DA [auth Ar]IPR001892Small ribosomal subunit protein uS13Family
DA [auth Ar]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
DA [auth Ar]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
FA [auth At]IPR001848Small ribosomal subunit protein uS10Family
FA [auth At]IPR027486Small ribosomal subunit protein uS10 domainDomain
FA [auth At]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
FA [auth At]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
FA [auth At]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
HA [auth Av]IPR000630Small ribosomal subunit protein uS8Family
HA [auth Av]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
HA [auth Av]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
IA [auth Aw]IPR006032Small ribosomal subunit protein uS12Family
IA [auth Aw]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IA [auth Aw]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
JA [auth Ax]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
JA [auth Ax]IPR001976Small ribosomal subunit protein eS24Family
JA [auth Ax]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
JA [auth Ax]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
KA [auth Ay]IPR004977Small ribosomal subunit protein eS25Family
KA [auth Ay]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
LA [auth Az]IPR007836Large ribosomal subunit protein eS32Family
D [auth AC]IPR019954Ubiquitin conserved siteConserved Site
D [auth AC]IPR000626Ubiquitin-like domainDomain
D [auth AC]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
D [auth AC]IPR002906Small ribosomal subunit protein eS31Domain
D [auth AC]IPR019956Ubiquitin domainDomain
D [auth AC]IPR050158Ubiquitin and ubiquitin-likeFamily
D [auth AC]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
D [auth AC]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
QA [auth BB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
QA [auth BB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
QA [auth BB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
QA [auth BB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
QA [auth BB]IPR000597Large ribosomal subunit protein uL3Family
RA [auth BC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
RA [auth BC]IPR002136Large ribosomal subunit protein uL4Family
RA [auth BC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
RA [auth BC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
RA [auth BC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
TA [auth BE]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
TA [auth BE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
TA [auth BE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
TA [auth BE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
TA [auth BE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
TA [auth BE]IPR000915Large ribosomal subunit protein eL6Family
WA [auth BH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
WA [auth BH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
WA [auth BH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
WA [auth BH]IPR000702Large ribosomal subunit protein uL6-likeFamily
E [auth AD]IPR039415Ubiquitin-like protein FUBIDomain
E [auth AD]IPR019956Ubiquitin domainDomain
E [auth AD]IPR019954Ubiquitin conserved siteConserved Site
E [auth AD]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
E [auth AD]IPR000626Ubiquitin-like domainDomain
E [auth AD]IPR006846Small ribosomal subunit protein eS30Family
XA [auth BI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
XA [auth BI]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
XA [auth BI]IPR016180Large ribosomal subunit protein uL16 domainDomain
XA [auth BI]IPR047873Large ribosomal subunit protein uL16Family
XA [auth BI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
YA [auth BJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
YA [auth BJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
YA [auth BJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
YA [auth BJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
YA [auth BJ]IPR002132Large ribosomal subunit protein uL5Family
ZA [auth BK]IPR022733DPUP/SUD, C-terminal, betacoronavirusDomain
ZA [auth BK]IPR042515Non-structural protein NSP15, N-terminal domain superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR043174Non-structural protein NSP15, middle domain superfamilyHomologous Superfamily
ZA [auth BK]IPR044315Nonstructural protein 14, betacoronavirusDomain
ZA [auth BK]IPR038123Non-structural protein NSP4, C-terminal superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR042570Non-structural protein NSP3, nucleic acid-binding domain superfamily, betacoronavirusHomologous Superfamily
ZA [auth BK]IPR043178Papain-like protease, thumb domain superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR046441RNA-dependent RNA polymerase, coronavirusDomain
ZA [auth BK]IPR044863Nidovirus RdRp-associated nucleotidyl transferase (NiRAN) domainDomain
ZA [auth BK]IPR044343Nonstructural protein 13, 1B domain, coronavirusDomain
ZA [auth BK]IPR038166Polyprotein cleavage domain PL2pro superfamily, betacoronavirusHomologous Superfamily
ZA [auth BK]IPR037227Endoribonuclease EndoU-likeHomologous Superfamily
ZA [auth BK]IPR027352Nonstructural protein 13, zinc-binding domain, coronavirus-likeDomain
ZA [auth BK]IPR009003Peptidase S1, PA clanHomologous Superfamily
ZA [auth BK]IPR013016Peptidase C16, coronavirusDomain
ZA [auth BK]IPR009466Non-structural protein 14, coronavirusDomain
ZA [auth BK]IPR044357NSP3, first ubiquitin-like (Ubl) domain, coronavirusDomain
ZA [auth BK]IPR046436Nidovirus 3'-5' exoribonuclease domainDomain
ZA [auth BK]IPR047570NSP12, interface domain, coronavirusDomain
ZA [auth BK]IPR018995RNA synthesis protein NSP10, coronavirusDomain
ZA [auth BK]IPR043615Nonstructural protein 2, N-terminal domain, coronavirusDomain
ZA [auth BK]IPR050534Coronaviruses polyprotein 1abFamily
ZA [auth BK]IPR043177Papain-like protease, N-terminal domain superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR043606Coronavirus replicase NSP15, N-terminal oligomerizationDomain
ZA [auth BK]IPR044330Nonstructural protein 15, N-terminal domain, alpha/beta-coronavirusDomain
ZA [auth BK]IPR041679DNA2/NAM7 helicase-like, C-terminalDomain
ZA [auth BK]IPR024375Non-structural protein NSP3, SUD-M domain, betacoronavirusDomain
ZA [auth BK]IPR014828Non-structural protein NSP7, coronavirusDomain
ZA [auth BK]IPR043503Papain-like viral protease, palm and finger domains, coronavirusHomologous Superfamily
ZA [auth BK]IPR014829Non-structural protein NSP8, coronavirusDomain
ZA [auth BK]IPR036499Non-structural protein NSP9 superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
ZA [auth BK]IPR044389Non-structural protein 2, SARS-CoV-likeDomain
ZA [auth BK]IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
ZA [auth BK]IPR008740Peptidase C30, coronavirusDomain
ZA [auth BK]IPR036333RNA synthesis protein NSP10 superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR047573Non-structural protein 2, middle domain, coronavirusDomain
ZA [auth BK]IPR049894Coronavirus NSP3, 3Ecto domainDomain
ZA [auth BK]IPR043472Macro domain-likeHomologous Superfamily
ZA [auth BK]IPR043609NendoU domain, nidovirusDomain
ZA [auth BK]IPR032592Non-structural protein NSP3, nucleic acid-binding domain, betacoronavirusDomain
ZA [auth BK]IPR043613Non-structural protein 2, C-terminal domain, coronavirusDomain
ZA [auth BK]IPR038083Non-structural protein NSP3A domain-like superfamilyHomologous Superfamily
ZA [auth BK]IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
ZA [auth BK]IPR044351RNA-dependent RNA polymerase, SARS-CoV-likeDomain
ZA [auth BK]IPR024358Non-structural protein NSP3, N-terminal, betacoronavirusDomain
ZA [auth BK]IPR048673Nonstructural protein 13, stalk domain, coronavirusDomain
ZA [auth BK]IPR046435NSP14, guanine-N7-methyltransferase domain, coronavirusDomain
ZA [auth BK]IPR009469RNA-dependent RNA polymerase, N-terminal, coronavirusDomain
ZA [auth BK]IPR043611Coronavirus replicase NSP3, C-terminalDomain
ZA [auth BK]IPR044864Non-structural protein NSP3, SUD-N (Mac2) domain, betacoronavirusDomain
ZA [auth BK]IPR047566Coronavirus replicase NSP3, Y domainDomain
ZA [auth BK]IPR048672Nonstructural protein 13, zinc-binding domain, coronavirusDomain
ZA [auth BK]IPR043612Non-structural protein NSP4, N-terminal, coronavirusDomain
ZA [auth BK]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
ZA [auth BK]IPR043608Nonstructural protein 15, middle domain, coronavirusDomain
ZA [auth BK]IPR044353NSP3, second ubiquitin-like (Ubl) domain, coronavirusDomain
ZA [auth BK]IPR037204Non-structural protein NSP7 superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR046443NSP1, globular domain, alpha/betacoronavirusDomain
ZA [auth BK]IPR043610Non-structural protein 6, coronavirusDomain
ZA [auth BK]IPR027351(+) RNA virus helicase core domainDomain
ZA [auth BK]IPR044322Nonstructural protein 15, middle domain, alpha/betacoronavirusDomain
ZA [auth BK]IPR009461Non-structural protein NSP16, coronavirus-likeDomain
ZA [auth BK]IPR043477Peptidase C30, domain 3, coronavirusHomologous Superfamily
ZA [auth BK]IPR043478Non-structural protein NSP3, SUD-N (Mac2) domain superfamily, betacoronavirusHomologous Superfamily
ZA [auth BK]IPR038400Non-structural protein NSP3, SUD-M domain superfamily, betacoronavirusHomologous Superfamily
ZA [auth BK]IPR046442NSP1, C-terminal domain, betacoronavirusDomain
ZA [auth BK]IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
ZA [auth BK]IPR044401NSP15, NendoU domain, coronavirusDomain
ZA [auth BK]IPR014822Non-structural protein NSP9, coronavirusDomain
ZA [auth BK]IPR038030NSP1 globular domain superfamily, betacoronavirusHomologous Superfamily
ZA [auth BK]IPR021590NSP1, globular domain, betacoronavirusDomain
ZA [auth BK]IPR044367Non-structural protein 6, betacoronavirusDomain
ZA [auth BK]IPR037230Non-structural protein NSP8 superfamily, coronavirusHomologous Superfamily
ZA [auth BK]IPR046440Arterivirus Nsp11 N-terminal/Coronavirus NSP15 middle domainDomain
ZA [auth BK]IPR032505Non-structural protein NSP4, C-terminal, coronavirusDomain
ZA [auth BK]IPR046438Nidovirus 2-O-methyltransferaseDomain
ZA [auth BK]IPR002589Macro domainDomain
ZA [auth BK]IPR047567Non-structural protein NSP3, group 2-specific marker domain, betacoronavirusDomain
ZA [auth BK]IPR044371Non-structural protein 3, X-domain-likeDomain
ZA [auth BK]IPR007094RNA-directed RNA polymerase, catalytic domainDomain
BB [auth BM]IPR039660Large ribosomal subunit protein eL14Family
BB [auth BM]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
BB [auth BM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
BB [auth BM]IPR002784Large ribosomal subunit protein eL14 domainDomain
BB [auth BM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CB [auth BN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
CB [auth BN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
CB [auth BN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
CB [auth BN]IPR000439Large ribosomal subunit protein eL15Family
GB [auth BR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
GB [auth BR]IPR039547Large ribosomal subunit protein eL19Family
GB [auth BR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
GB [auth BR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
GB [auth BR]IPR000196Large ribosomal subunit protein eL19 domainDomain
GB [auth BR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
IB [auth BT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
IB [auth BT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
IB [auth BT]IPR001147Large ribosomal subunit protein eL21Family
IB [auth BT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
KB [auth BV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
KB [auth BV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
KB [auth BV]IPR000218Large ribosomal subunit protein uL14Family
LB [auth BW]IPR011017TRASH domainDomain
LB [auth BW]IPR000988Large ribosomal subunit protein eL24-relatedFamily
LB [auth BW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
LB [auth BW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
MB [auth BX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
MB [auth BX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
MB [auth BX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
MB [auth BX]IPR019985Large ribosomal subunit protein uL23Family
MB [auth BX]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
MB [auth BX]IPR013025Large ribosomal subunit protein uL23-likeFamily
NB [auth BY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
NB [auth BY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NB [auth BY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
NB [auth BY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
NB [auth BY]IPR005824KOWDomain
NB [auth BY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
OB [auth BZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
OB [auth BZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
OB [auth BZ]IPR001141Large ribosomal subunit protein eL27Family
OB [auth BZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
OB [auth BZ]IPR005824KOWDomain
OB [auth BZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
PB [auth Ba]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
PB [auth Ba]IPR021131Large ribosomal subunit protein uL15/eL18Domain
PB [auth Ba]IPR030878Large ribosomal subunit protein uL15Family
PB [auth Ba]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
PB [auth Ba]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
QB [auth Bb]IPR002673Large ribosomal subunit protein eL29Family
G [auth AF]IPR019775WD40 repeat, conserved siteConserved Site
G [auth AF]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
G [auth AF]IPR045223Small ribosomal subunit protein RACK1-likeFamily
G [auth AF]IPR001680WD40 repeatRepeat
G [auth AF]IPR020472G-protein beta WD-40 repeatRepeat
G [auth AF]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
RB [auth Bc]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
RB [auth Bc]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
RB [auth Bc]IPR000231Large ribosomal subunit protein eL30Family
RB [auth Bc]IPR039109Large ribosomal subunit protein eL30-likeFamily
RB [auth Bc]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
SB [auth Bd]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
SB [auth Bd]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
SB [auth Bd]IPR000054Large ribosomal subunit protein eL31Family
UB [auth Bf]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
UB [auth Bf]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
UB [auth Bf]IPR001780Large ribosomal subunit protein eL33Family
UB [auth Bf]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
VB [auth Bg]IPR008195Large ribosomal subunit protein eL34Family
VB [auth Bg]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
WB [auth Bh]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
WB [auth Bh]IPR001854Large ribosomal subunit protein uL29Family
WB [auth Bh]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
WB [auth Bh]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
XB [auth Bi]IPR000509Large ribosomal subunit protein eL36Family
XB [auth Bi]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
YB [auth Bj]IPR001569Large ribosomal subunit protein eL37Family
YB [auth Bj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
YB [auth Bj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
YB [auth Bj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
ZB [auth Bk]IPR002675Large ribosomal subunit protein eL38Family
ZB [auth Bk]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
AC [auth Bl]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
AC [auth Bl]IPR000077Large ribosomal subunit protein eL39Family
AC [auth Bl]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
H [auth AG]IPR001209Small ribosomal subunit protein uS14Family
H [auth AG]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
H [auth AG]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
H [auth AG]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
DC [auth Bp]IPR002674Large ribosomal subunit protein eL43Family
DC [auth Bp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DC [auth Bp]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
FC [auth Bs]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
FC [auth Bs]IPR001790Large ribosomal subunit protein uL10Family
FC [auth Bs]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
FC [auth Bs]IPR030670Large ribosomal subunit protein uL10, eukaryotesFamily
FC [auth Bs]IPR050323Universal ribosomal protein uL10Family
FC [auth Bs]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
GC [auth Bt]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
GC [auth Bt]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
GC [auth Bt]IPR000911Ribosomal protein uL11Family
GC [auth Bt]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
GC [auth Bt]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
GC [auth Bt]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
HC [auth Bv]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
HC [auth Bv]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
HC [auth Bv]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
HC [auth Bv]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
HC [auth Bv]IPR002143Large ribosomal subunit protein uL1Family
HC [auth Bv]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A [auth A2]4AC
A [auth A2]6MZ Parent Component: A

A [auth A2]A2M Parent Component: A

A [auth A2]B8N
A [auth A2]G7M Parent Component: G

A [auth A2]MA6 Parent Component: A

A [auth A2]OMC Parent Component: C

A [auth A2]OMG Parent Component: G

A [auth A2]OMU Parent Component: U

A [auth A2]PSU Parent Component: U

K [auth AT]1MA Parent Component: A

K [auth AT]2MG Parent Component: G

K [auth AT]5MC Parent Component: C

K [auth AT]5MU Parent Component: U

K [auth AT]G7M Parent Component: G

K [auth AT]H2U Parent Component: U

K [auth AT]M2G Parent Component: G

K [auth AT]OMC Parent Component: C

K [auth AT]OMG Parent Component: G

K [auth AT]PSU Parent Component: U

K [auth AT]YYG Parent Component: G

L [auth AZ]SAC Parent Component: SER

DA [auth Ar]SAC Parent Component: SER

EA [auth As]NMM Parent Component: ARG

GA [auth Au]AME Parent Component: MET

IA [auth Aw]HY3 Parent Component: PRO

RESIDAA0029

PSI-MOD :  3-hydroxy-L-proline MOD:00038
MA [auth B5]1MA Parent Component: A

RESIDAA0029

MA [auth B5]5MC Parent Component: C

RESIDAA0029

MA [auth B5]6MZ Parent Component: A

RESIDAA0029

MA [auth B5]A2M Parent Component: A

RESIDAA0029

MA [auth B5]OMC Parent Component: C

RESIDAA0029

MA [auth B5]OMG Parent Component: G

RESIDAA0029

MA [auth B5]OMU Parent Component: U

RESIDAA0029

MA [auth B5]PSU Parent Component: U

RESIDAA0029

MA [auth B5]UR3 Parent Component: U

RESIDAA0029

MA [auth B5]UY1 RESIDAA0029

NA [auth B7]GTP Parent Component: G

RESIDAA0029

OA [auth B8]OMG Parent Component: G

RESIDAA0029

OA [auth B8]PSU Parent Component: U

RESIDAA0029

PA [auth BA]V5N Parent Component: HIS

RESIDAA0029

QA [auth BB]HIC Parent Component: HIS

RESIDAA0029 , AA0317

PSI-MOD :  3-hydroxy-L-proline MOD:00038 , 1'-methyl-L-histidine MOD:00322
RA [auth BC]AYA Parent Component: ALA

RESIDAA0029 , AA0317

SA [auth BD]AAC RESIDAA0029 , AA0317

PB [auth Ba]V5N Parent Component: HIS

RESIDAA0029 , AA0317

QB [auth Bb]MLZ Parent Component: LYS

RESIDAA0029 , AA0317 , AA0076

PSI-MOD :  3-hydroxy-L-proline MOD:00038 , 1'-methyl-L-histidine MOD:00322 , N6-methyl-L-lysine MOD:00085
BC [auth Bm]M3L Parent Component: LYS

RESIDAA0029 , AA0317 , AA0076 , AA0074

PSI-MOD :  3-hydroxy-L-proline MOD:00038 , 1'-methyl-L-histidine MOD:00322 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083
CC [auth Bo]MLZ Parent Component: LYS

RESIDAA0029 , AA0317 , AA0076 , AA0074 , AA0076

PSI-MOD :  3-hydroxy-L-proline MOD:00038 , 1'-methyl-L-histidine MOD:00322 , N6-methyl-L-lysine MOD:00085 , N6,N6,N6-trimethyl-L-lysine MOD:00083 , N6-methyl-L-lysine MOD:00085
EC [auth Br]SAC Parent Component: SER

RESIDAA0029 , AA0317 , AA0076 , AA0074 , AA0076